Pandoraea pnomenusa DSM 16536: LV28_21645
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Entry
LV28_21645 CDS
T03411
Name
(GenBank) hypothetical protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_21645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_21645
Transporters [BR:
ppnm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LV28_21645
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
nSTAND_NTPase5
AAA_29
nSTAND3
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIU28824
LinkDB
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Position
complement(3840881..3841990)
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AA seq
369 aa
AA seq
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MASASAASPTLTDAYLHVSRLCKSYDGVHRVVDDVNLEIRRGEFVTFLGPSGSGKTTTLS
MIAGFETPTAGDIRVNGRSLVQIPVHQRNIGLVFQSYALFPHMTAAQNVAFPLRMRKVNT
ADQVRRAQRALDIVGLGQHGARMPSQLSGGQQQRVALARALVFEPDVLLLDEPLSALDKN
LRVQMQIEIKRLHTELGMTTVFVTHDQGEAMTMSDRIAVFNAGRVEQFAAPLDLYGAPCT
RFVGEFIGESNFIEVSVVDAAKGEYASPALGSVRAATCEKIAGSAVSLLLRPEWIRLGTG
GGTACSAGVKDAQLEVTNVIHYGDSALVIGHSAGLPLRVKVPNIDMQGVTVGSRHPIHWD
PVHTHVLSD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgccagtgcggcgtctcccacgctgaccgatgcgtacctgcatgtcagtcgc
ctgtgcaagtcgtacgacggtgttcaccgcgtcgtggacgacgtcaatctcgagatccgc
cgcggcgagttcgtcacgtttctcgggccgagcggctcgggcaagacgaccacgttgtcg
atgatcgcaggattcgagacgccgacggcaggcgacattcgagtcaacggccgctcgctg
gtgcagatccccgtgcatcagcgcaatatcggcctggtgttccagagctatgcattgttt
ccgcacatgacggcagcgcagaatgtcgcgtttccgctgcgcatgcgaaaggtcaatacg
gcggaccaggtcaggcgcgcacagcgcgcgctcgacatcgtcggccttggccagcacggg
gcgcgaatgccgtcgcagctctccggtggccagcagcaacgcgtggcgcttgcgcgggcg
ctggtgttcgagcctgatgtgctgttgctcgacgagccactctccgcgctcgacaagaac
ctgcgcgtgcagatgcagatcgagatcaagcgcctgcacaccgagctgggcatgacgacg
gttttcgtcacgcacgaccagggcgaggcgatgacgatgtccgatcgcatcgcggtgttc
aacgccggccgggtggagcagttcgccgcgccgctggatctgtacggggcgccttgcacg
cggtttgtcggcgaattcatcggcgagagcaacttcatcgaggtgagcgtggtcgacgcg
gccaagggggaatatgcctcgccggcactgggcagcgtgcgtgccgcgacgtgcgagaag
attgcgggctcggcggtgtcgctgctgcttcgtcccgaatggatccgcctggggacgggc
ggtggcaccgcctgctcggctggtgtgaaggatgcgcagctggaggtgacgaacgtcatt
cactacggcgacagcgcgttggtgatcggacacagcgcgggcctgccgctgcgcgtgaaa
gtgccgaacatcgacatgcagggggtgacggtcggcagtcgtcatccgattcattgggat
ccggttcacacgcatgtgttgagcgactga
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