Pandoraea pnomenusa DSM 16536: LV28_23000
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Entry
LV28_23000 CDS
T03411
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00860
Porphyrin metabolism
ppnm01100
Metabolic pathways
ppnm01240
Biosynthesis of cofactors
Module
ppnm_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LV28_23000
Enzymes [BR:
ppnm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
LV28_23000
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GFIT
Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
AIU29058
UniProt:
A0A378YYM4
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All DBs
Position
complement(3537033..3537971)
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AA seq
312 aa
AA seq
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MTFFSVLLALILEQVRALSTQNPVYNLIRSHATHTSQTFDAGQPRHGVLAWLVVVLPFVL
VVAVVYYLLMRVNIFLGFAWNVLIVYLTMGFRQFSHYFTDIHVALNNDNVNEAREILRQW
IGIDTVDMPVDEIVRHTLLHAVIASHRHVFGVFFWFLMPIGPAGAVLYRLAEYLSRRWTE
PAPDRSPAFGAFARKAFYVIDWVPARLTAIGFAIVGNFEDAIYAWRHYAKQWPNENEGIL
LAAGSGALGARLTGPLAEVSSVDALNQGDDAVLPVGSECTPRTLQAAVGLVWRAVLLWML
LLLLLTLAVWLG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacattcttttcagtactcctcgcgctgatcctcgagcaggtgcgtgccctctccacg
caaaacccggtctacaacctgattcgctcccacgcgacgcacacttcgcaaacgttcgat
gccgggcaaccgcgtcatggcgtgctggcgtggctcgtcgtcgtgctgccgttcgtcctg
gttgtcgccgtggtctactacctgctcatgcgggtcaacattttcctcggcttcgcgtgg
aacgttctcatcgtatatctgacgatgggatttcgtcagttcagccactatttcaccgac
attcacgtcgcgctgaacaacgacaatgtgaatgaagcgcgcgagatcctgcgtcaatgg
atcggcatcgacacggtcgacatgccggtcgacgagatcgtgcgtcacacgctgctgcat
gcggttatcgcgtcgcatcggcatgtcttcggcgtgttcttctggttcctgatgcccatc
gggccggcgggggcggtgctgtaccgcctggccgaatacctgtcgcgccgctggaccgaa
ccggcgccagatcgcagcccggcattcggcgcgtttgcgcgaaaggcgttctacgtcatc
gactgggtgccggcgcgcctgactgccatcggctttgccatcgtcggcaatttcgaagac
gccatttacgcgtggcgacactatgccaagcaatggcctaacgaaaacgaaggcattctg
ctcgcggcaggcagcggcgccctcggtgcgcggctgaccgggccgctcgcggaggtgtcc
agtgtcgacgcgctcaatcagggtgacgacgcggtcttgccggtggggagcgaatgtacg
cctcgcacgcttcaggctgccgtggggctcgtgtggcgcgccgtgctgctatggatgctg
ctgcttttgctgctgacgcttgccgtttggcttggctga
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