KEGG   Pandoraea pnomenusa DSM 16536: LV28_23175
Entry
LV28_23175        CDS       T03411                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppnm03032]
    LV28_23175
   03036 Chromosome and associated proteins [BR:ppnm03036]
    LV28_23175
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppnm02048]
    LV28_23175
Enzymes [BR:ppnm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LV28_23175
DNA replication proteins [BR:ppnm03032]
 Prokaryotic type
  DNA Topoisomerases
   LV28_23175
Chromosome and associated proteins [BR:ppnm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LV28_23175
Prokaryotic defense system [BR:ppnm02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LV28_23175
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim
Other DBs
NCBI-ProteinID: AIU29089
UniProt: A0A378YX06
LinkDB
Position
complement(3499136..3501115)
AA seq 659 aa
MSKKNTPAQYSEASIKVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGYGKEI
LVTLNRDGSVSVEDDGRGIPVGIHPEEGVPVVEIVFTRLHAGGKFDKAAGGAYTFSGGLH
GVGVSVTNALATRLAVTVWRDGQVSELEFADGGNVSVALHSRAAQRGEKRSGTRVTVWPD
ARYFDSPTLPLGELQRLLRSKAVLLPGVRVTLRQEKNGEAQSWFYEHGLRGYLVESLNGA
EPLIPLFEGERFADGNEDSFAEGEGAAWVVAWTEDGAQVRESYVNLIPTPAGGTHESGLR
EGLFQAVRGFIELHNLQPKGVKLLPEDVFSRVSFVLSAKVLDPQFQGQIKERLNSRDAVR
LVSSFTRPALELWLNHHVEHGKKLAELVIRQAQARTRAGQKIEKKKSSGVAVLPGKLTDC
ETEDITRNELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNTWETERDRLFANNEVHDI
AVAIGVDPHGANDTPDLSNLRYGKICILSDADVDGSHIQVLLLTLFFRHFPQLIAKGHVY
VARPPLYRVDAPARGKKPAQKLYALDEGELESILDKLRKDGVRETAWSISRFKGLGEMSA
EQLWETTMNPDTRRLSPVALGGLDFDATVARMNMLMGKGEAAQRRSWLEAKGNEVEADI
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtcgaaaaaaaatacgcctgcccagtacagcgaagcgtccatcaaggtcctcaagggc
cttgagccggtcaagcaacgcccgggcatgtacacccgcacggaaaacccgctgcacatc
attcaggaagtcatcgacaacgcgtcggacgaagcgcttggcgggtacggcaaggagatt
ctcgtcaccctgaaccgggatggctccgtgagcgtcgaggacgacggtcgcggcattccg
gtcggcatccatccggaagaaggcgtgccggtggtcgaaatcgtcttcacgcggctgcac
gccggtggcaagttcgacaaggctgccgggggcgcgtacaccttctcgggcggtctccac
ggggtgggcgtgtcggtgacgaacgctctggccacgcggctggccgtgacggtctggcgc
gatggccaggtctccgagctcgaattcgccgacggcggcaacgtcagcgtggcgctgcat
tcgcgagcggcgcaacgtggtgagaagaggagtggcacgcgtgtcacggtctggccggac
gcccgatacttcgatagccccacattgccgctgggcgagttgcaacgcctgctgcgctcg
aaggccgtgctgttgccgggcgtgcgcgtcacgttgcgccaggagaagaacggcgaagcg
cagagctggttctatgagcatggcctgcgagggtatctggtcgaatcgctcaacggcgcg
gagccgctcattccgttgttcgaaggcgagcgtttcgccgacggcaacgaagacagcttt
gcggaaggcgagggcgccgcgtgggtcgtggcctggaccgaagacggtgcgcaagtgcgc
gagtcttacgtcaacctgattcccacgcctgccggcggcacgcatgaatccggcctgcgc
gaggggctgttccaggccgtgcgcggcttcatcgaactgcacaatctccagcccaagggc
gtgaaactgctgcctgaggacgtcttctcgcgcgtgtcgttcgtgctctcggccaaggtg
ctcgatccgcagttccaggggcagatcaaggaacgcctgaacagtcgcgatgccgtgcgt
ctcgtgtcgtcgttcacgcgccccgcgctcgagctgtggctcaaccatcatgtcgagcac
ggcaagaagctcgccgagctcgtgatccgtcaggcccaggcgcgcacgcgcgccggtcag
aagatcgagaagaagaagagctcaggggtggcggtgctgcccggcaagttgaccgattgc
gagaccgaggacatcacgcgcaacgaactcttcctcgtggagggcgactcggcgggtggg
tcggcgaagatggggcgtgacaaggagtttcaggcgatcctgccgttgcgcggcaaggtg
ctcaacacgtgggagaccgagcgcgaccgcctcttcgccaacaacgaagtgcacgatatc
gccgtggccatcggtgtggatccgcacggcgcgaacgatacgcctgacctgtcgaacctg
cgctacgggaagatctgcatcctctccgatgctgacgtcgatggctcgcatatccaggtg
ctgctgctcacactgttcttccggcattttccgcaactcatcgccaagggccacgtctac
gttgcgcgtccgccgctgtatcgcgtggatgcgccggcccgtggcaagaagcccgcgcag
aaactctacgcgctggacgaaggcgaactcgagtcgattctcgacaagctgcgcaaggac
ggggtgcgcgagaccgcctggtcgatcagccgcttcaaggggctgggcgagatgagcgcg
gagcagctctgggaaacgaccatgaaccccgatacccgccggctgagcccggtggcgctc
ggcggcctcgatttcgatgccacggtcgcacgcatgaacatgctcatgggcaagggcgag
gcggcccagcgccgcagctggctcgaggccaagggcaacgaagtcgaagccgacatctga

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