Pandoraea pnomenusa DSM 16536: LV28_23575
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Entry
LV28_23575 CDS
T03411
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LV28_23575
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppnm01007
]
LV28_23575
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppnm03016
]
LV28_23575
Enzymes [BR:
ppnm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LV28_23575
Amino acid related enzymes [BR:
ppnm01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LV28_23575
Transfer RNA biogenesis [BR:
ppnm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LV28_23575
Prokaryotic type
LV28_23575
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AIU29157
UniProt:
A0A378YYY0
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Position
complement(3422276..3423478)
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AA seq
400 aa
AA seq
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MYPERVFSGMRPTGRLHLGHYHGVLKNWIQLQSEYPCYFCVVDWHALTTHYETPEVIEQN
VWDVLIDWLAAGIDPNQATLFIQSKVPEHAELALLIGMSTPLGWLERVPTYKEQIEKLRE
KDLSTYGFLGYPVLMAADILLYRALHVPVGEDQVPHVEMTREIARRFNYLYGREAGFEEK
ALAAAKKLGSKRAKLYLELRTGYQEQGDEEALEQARAMLSESQSLSMGDRERLFGYLEGA
RKLILVEPQALLTPASRMPGLDGQKMSKSYNNTIGLREDAESITKKVRTMPTDPARVRRT
DPGDPDKCPVWQLHQVYSDDDTREWVQKGCRSAGIGCIECKQPVIEGILREQQPMLERAQ
KYMDDPSLLRAIVADGCEKARKSAQEIMRDVREAMGLQYS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccgaacgcgttttctccggcatgcgaccgaccggtcgtctgcacctcggtcac
taccacggcgtgctcaagaactggattcagcttcagtcggagtatccgtgctacttctgt
gtggtcgactggcacgcgctcaccacgcactacgaaacgccggaagtcatcgagcagaac
gtgtgggacgtactcatcgactggcttgccgcggggatcgatccgaatcaggcgacgttg
ttcatccagagcaaggtgcccgagcacgccgaactggccctgctgatcggcatgagcacg
ccgctgggttggctcgaacgtgtgccgacgtacaaggagcagatcgagaagctcagggaa
aaggacctctcgacctacggcttccttggctaccctgtgctgatggcggccgacatcctg
ctttatcgcgcgctgcatgtgccggtgggcgaggatcaggtgccgcacgtcgagatgaca
cgcgaaatcgcgcgtcgtttcaactacctttatggccgcgaggcgggattcgaggagaag
gcgctggcagcggcgaaaaagctgggcagcaagcgcgcgaagctgtatctggaactgcgt
accgggtaccaggagcagggcgacgaggaggcgctggagcaggcacgcgcgatgctctcc
gagtcccagtcgctgtcgatgggcgaccgcgagcggctgttcggctatctcgagggcgcg
cgcaagctgattctcgtcgagccgcaggcgctgctcacgccggcatcccgcatgccgggg
ctcgacggccagaaaatgtcgaagtcttacaacaacaccatcggcctgcgcgaagacgca
gaatcgatcacgaagaaggtgcgcacgatgcccaccgaccccgcgcgcgtgcgtcgcacc
gatccgggggatccggacaagtgcccggtgtggcagttgcatcaggtctacagcgacgac
gacacgcgcgaatgggtgcaaaagggctgtcgcagcgccggaatcggttgcatcgagtgc
aagcagccagtgatcgaaggcattttgcgtgagcagcaacccatgctcgagcgtgcacag
aagtacatggacgatccgtcgctgctgcgcgccattgtggcagacggctgtgaaaaagcc
cgtaagtcggcgcaggaaatcatgcgcgacgtgcgcgaagccatgggacttcagtattca
tga
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