Pandoraea pnomenusa DSM 16536: LV28_23945
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Entry
LV28_23945 CDS
T03411
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppnm03016
]
LV28_23945
Enzymes [BR:
ppnm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LV28_23945
Transfer RNA biogenesis [BR:
ppnm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LV28_23945
Prokaryotic type
LV28_23945
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
SUKH-3
Motif
Other DBs
NCBI-ProteinID:
AIU29227
UniProt:
A0A378YZ55
LinkDB
All DBs
Position
complement(3341320..3342120)
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AA seq
266 aa
AA seq
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MRIALGIHYDGTAFSGWQSQPHGNTVQQALEAALREFGGVALPTTVAGRTDTGVHGIGQV
VHFDTELDRAMFSWVRGVNAFLPKTVAVQWAQAMPDDFHARFAAFERTYFYVLYVHPVRS
PLLDGRCGWLHTPLDLDAMRTAGQALVGEHDFSAFRSSECQAKTPVKHLYGIDIEQQGHF
FVFRFRASAFLHHMVRNIMGCLLAIGRGRQPASWMAHVLASLDRRQAAPTFMPDGLYLAR
VGYPERFAVPEPNWAAWPFPMPWARS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgcactgggcatccattacgacggcacggcgttctccggctggcaatcgcag
ccgcacggcaacaccgtgcagcaggcgctcgaagccgcattgcgggaattcggcggcgtg
gcgttgcccacgacggtcgcgggccgcaccgacaccggtgtgcacggcattggtcaggtc
gtacacttcgacacggaactggaccgggcgatgttttcgtgggtgcgcggcgtcaacgcg
ttcctgccgaaaacggttgccgtgcaatgggcgcaggcgatgccggacgattttcacgca
cgattcgcggcgttcgagcgcacctacttctatgtgctgtacgtgcatccggtgcgctcc
ccgctgctcgacggtcgctgtggctggctgcacacgccgctcgatctcgacgccatgcgc
accgccggccaggcactcgtgggcgagcacgacttctcagcgttccggtcgtccgaatgc
caggcgaaaacgccggtcaagcatctctatggcatcgatatcgagcagcaggggcacttc
ttcgtgttccgctttcgcgcaagcgccttcctgcaccacatggtgcgcaacatcatggga
tgcctgctggcgatcggccgtgggcgccagccggcgagctggatggcgcacgtgctcgcg
agtctggaccgccgtcaggccgcgccgacgttcatgcccgatggcctgtatctggcacgc
gtggggtatcctgagcgtttcgccgtgcccgagcccaactgggctgcgtggccatttccg
atgccgtgggcccgttcatga
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