KEGG   Pandoraea pnomenusa DSM 16536: LV28_24425
Entry
LV28_24425        CDS       T03411                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Pathway
ppnm00010  Glycolysis / Gluconeogenesis
ppnm00020  Citrate cycle (TCA cycle)
ppnm00260  Glycine, serine and threonine metabolism
ppnm00280  Valine, leucine and isoleucine degradation
ppnm00310  Lysine degradation
ppnm00380  Tryptophan metabolism
ppnm00620  Pyruvate metabolism
ppnm00630  Glyoxylate and dicarboxylate metabolism
ppnm00640  Propanoate metabolism
ppnm00670  One carbon pool by folate
ppnm00785  Lipoic acid metabolism
ppnm01100  Metabolic pathways
ppnm01110  Biosynthesis of secondary metabolites
ppnm01120  Microbial metabolism in diverse environments
ppnm01200  Carbon metabolism
ppnm01210  2-Oxocarboxylic acid metabolism
ppnm01240  Biosynthesis of cofactors
Module
ppnm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppnm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppnm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ppnm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LV28_24425
   00020 Citrate cycle (TCA cycle)
    LV28_24425
   00620 Pyruvate metabolism
    LV28_24425
   00630 Glyoxylate and dicarboxylate metabolism
    LV28_24425
   00640 Propanoate metabolism
    LV28_24425
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LV28_24425
   00280 Valine, leucine and isoleucine degradation
    LV28_24425
   00310 Lysine degradation
    LV28_24425
   00380 Tryptophan metabolism
    LV28_24425
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LV28_24425
   00670 One carbon pool by folate
    LV28_24425
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppnm04147]
    LV28_24425
Enzymes [BR:ppnm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LV28_24425
Exosome [BR:ppnm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LV28_24425
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Pyr_redox_3 NAD_binding_8 Thi4 GCV_H FAD_binding_2 DAO Biotin_lipoyl_2 FAD_binding_3 HI0933_like AlaDh_PNT_C 3HCDH_N
Other DBs
NCBI-ProteinID: AIU29303
UniProt: A0A378YYR7
LinkDB
Position
complement(3234852..3236630)
AA seq 592 aa
MSLIEVKVPDIGAEGVDVIEVMIKPGDKIAKDASLITLESDKASMEVPSEVAGTVKEVKI
KVGDKASQGTLIALVEADDAGVATASAPAAAAPAPQTAQAAPAAPAASSAPAPAAATHAG
GADTECDVVVLGAGPGGYSAAFRSADLGRKTVLIERYATLGGVCLNVGCIPSKALLHTAA
VLEEAQSLGHHGISFAKPEIDLDKLRSYKESVVGKLTGGLAGMAKMRKVEVVRGVGTFLD
PNHIEVVDGEGNKRVVKFAQAIIAAGSQAVKLPFLPEDPRIVDSTGALELRQMPKKMLVI
GGGIIGLEMATVYSALGAEIDVVEMLDGLMQGADRDLVKVWEKMNAKRFGRVMLKTKTVG
AEAKPDGIYVKFEGESAPAEPQRYDLVLVAVGRSPNGKKIGAEKAGVAVGDRGFISVDKQ
MRTNVPNIFAIGDIVGQPMLAHKAVHEAHVAAEAAAGEKAYFDAIQIPSVAYTDPEVAWA
GKTEDQLKAEGVKYGKAVFPWAASGRAIANGRDEGFTKVLFDEETHRIVGGAIVGTHAGD
LIGELCLAVEMGADAVDIGKTIHPHPTLAESVGMAAEIYEGVCTDVPPARKK
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgagtctcattgaagtcaaggtgccggatatcggcgcagagggcgtggatgtcatcgaa
gtgatgatcaagcccggcgacaagatcgccaaggatgcgtcgctcatcacgctggaatcg
gacaaggcgtccatggaagtgccgtccgaagtggcgggcaccgtcaaggaagtgaagatc
aaggttggtgacaaggccagccagggcacgctgatcgcgctcgtcgaagccgacgacgcg
ggtgtcgcaacggcctctgcgccggccgccgctgcgcccgcgccgcaaacggcccaggca
gcgccggcagcgccagccgcatcgagcgcacccgcaccggccgcggccacgcatgccggt
ggcgccgacaccgagtgcgacgtggtcgtgctcggcgcaggaccgggcgggtactcggcc
gccttccgcagtgccgatctggggcgcaagaccgtgctgatcgagcgctacgcgacgctc
ggcggcgtgtgtctgaacgtggggtgtattccgtcgaaggcgctgcttcacacggccgcc
gtgcttgaagaggcgcaatcgcttgggcatcacggtatctcgtttgcgaagcccgagatc
gacctcgacaagctgcgcagctacaaggaaagcgtggtcggcaaactcaccggcggcctg
gcgggcatggccaagatgcgcaaggtcgaagtcgtgcgcggcgtgggcaccttcctcgac
ccgaatcacatcgaagtcgtggacggcgagggcaacaagcgcgtggtgaagttcgcgcag
gcgatcattgcggctggctcacaagccgtcaagctgccgttcctgccggaagacccgcgc
atcgtcgattcgaccggtgcgctggagttgcgccagatgccgaagaagatgctggtgatc
ggcggtggcatcatcggtctcgagatggcgacggtgtacagcgcgctgggtgccgaaatc
gacgtcgtcgaaatgctcgatggcctgatgcagggcgcggaccgcgatctcgtcaaggtc
tgggagaaaatgaacgccaagcgcttcggtcgcgtcatgctcaagaccaagaccgtgggt
gccgaagccaagcccgacggcatttatgtgaaattcgaaggcgaatccgcaccggccgag
ccgcaacgctacgacctcgtgctcgtcgcggtgggccgcagcccgaacggcaagaagatc
ggcgcggagaaggcgggcgtggcggtgggcgatcgcgggttcatttccgtcgacaagcaa
atgcgcaccaacgtgccgaacattttcgccatcggcgatatcgtcggccagccgatgctc
gcgcacaaggcggtgcatgaggcgcacgtggctgccgaggcggcagcgggtgagaaggct
tacttcgatgcgatccagattccctcggtcgcgtacaccgatccggaagtggcctgggct
ggcaagaccgaggatcagttgaaagccgaaggtgtgaagtacggcaaggccgtgttcccg
tgggcggcgtcgggccgcgcgatcgcgaacggccgcgacgagggcttcaccaaggtgctg
ttcgacgaagaaacccatcgcatcgttggcggcgcgatcgtcggcacccatgcgggcgat
ctgatcggcgagctttgcctggcggtcgagatgggcgccgacgcggtcgacatcggcaag
acgatccatccgcatccgacgctggccgaatcggtcggcatggccgcggagatctatgaa
ggggtgtgcaccgatgtgccgcctgctcgcaagaagtga

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