Pandoraea pnomenusa DSM 16536: LV28_24425
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Entry
LV28_24425 CDS
T03411
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00010
Glycolysis / Gluconeogenesis
ppnm00020
Citrate cycle (TCA cycle)
ppnm00260
Glycine, serine and threonine metabolism
ppnm00280
Valine, leucine and isoleucine degradation
ppnm00310
Lysine degradation
ppnm00380
Tryptophan metabolism
ppnm00620
Pyruvate metabolism
ppnm00630
Glyoxylate and dicarboxylate metabolism
ppnm00640
Propanoate metabolism
ppnm00670
One carbon pool by folate
ppnm00785
Lipoic acid metabolism
ppnm01100
Metabolic pathways
ppnm01110
Biosynthesis of secondary metabolites
ppnm01120
Microbial metabolism in diverse environments
ppnm01200
Carbon metabolism
ppnm01210
2-Oxocarboxylic acid metabolism
ppnm01240
Biosynthesis of cofactors
Module
ppnm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppnm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppnm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ppnm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LV28_24425
00020 Citrate cycle (TCA cycle)
LV28_24425
00620 Pyruvate metabolism
LV28_24425
00630 Glyoxylate and dicarboxylate metabolism
LV28_24425
00640 Propanoate metabolism
LV28_24425
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LV28_24425
00280 Valine, leucine and isoleucine degradation
LV28_24425
00310 Lysine degradation
LV28_24425
00380 Tryptophan metabolism
LV28_24425
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LV28_24425
00670 One carbon pool by folate
LV28_24425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppnm04147
]
LV28_24425
Enzymes [BR:
ppnm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LV28_24425
Exosome [BR:
ppnm04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LV28_24425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
NAD_binding_8
Thi4
GCV_H
FAD_binding_2
DAO
Biotin_lipoyl_2
FAD_binding_3
HI0933_like
AlaDh_PNT_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AIU29303
UniProt:
A0A378YYR7
LinkDB
All DBs
Position
complement(3234852..3236630)
Genome browser
AA seq
592 aa
AA seq
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MSLIEVKVPDIGAEGVDVIEVMIKPGDKIAKDASLITLESDKASMEVPSEVAGTVKEVKI
KVGDKASQGTLIALVEADDAGVATASAPAAAAPAPQTAQAAPAAPAASSAPAPAAATHAG
GADTECDVVVLGAGPGGYSAAFRSADLGRKTVLIERYATLGGVCLNVGCIPSKALLHTAA
VLEEAQSLGHHGISFAKPEIDLDKLRSYKESVVGKLTGGLAGMAKMRKVEVVRGVGTFLD
PNHIEVVDGEGNKRVVKFAQAIIAAGSQAVKLPFLPEDPRIVDSTGALELRQMPKKMLVI
GGGIIGLEMATVYSALGAEIDVVEMLDGLMQGADRDLVKVWEKMNAKRFGRVMLKTKTVG
AEAKPDGIYVKFEGESAPAEPQRYDLVLVAVGRSPNGKKIGAEKAGVAVGDRGFISVDKQ
MRTNVPNIFAIGDIVGQPMLAHKAVHEAHVAAEAAAGEKAYFDAIQIPSVAYTDPEVAWA
GKTEDQLKAEGVKYGKAVFPWAASGRAIANGRDEGFTKVLFDEETHRIVGGAIVGTHAGD
LIGELCLAVEMGADAVDIGKTIHPHPTLAESVGMAAEIYEGVCTDVPPARKK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcattgaagtcaaggtgccggatatcggcgcagagggcgtggatgtcatcgaa
gtgatgatcaagcccggcgacaagatcgccaaggatgcgtcgctcatcacgctggaatcg
gacaaggcgtccatggaagtgccgtccgaagtggcgggcaccgtcaaggaagtgaagatc
aaggttggtgacaaggccagccagggcacgctgatcgcgctcgtcgaagccgacgacgcg
ggtgtcgcaacggcctctgcgccggccgccgctgcgcccgcgccgcaaacggcccaggca
gcgccggcagcgccagccgcatcgagcgcacccgcaccggccgcggccacgcatgccggt
ggcgccgacaccgagtgcgacgtggtcgtgctcggcgcaggaccgggcgggtactcggcc
gccttccgcagtgccgatctggggcgcaagaccgtgctgatcgagcgctacgcgacgctc
ggcggcgtgtgtctgaacgtggggtgtattccgtcgaaggcgctgcttcacacggccgcc
gtgcttgaagaggcgcaatcgcttgggcatcacggtatctcgtttgcgaagcccgagatc
gacctcgacaagctgcgcagctacaaggaaagcgtggtcggcaaactcaccggcggcctg
gcgggcatggccaagatgcgcaaggtcgaagtcgtgcgcggcgtgggcaccttcctcgac
ccgaatcacatcgaagtcgtggacggcgagggcaacaagcgcgtggtgaagttcgcgcag
gcgatcattgcggctggctcacaagccgtcaagctgccgttcctgccggaagacccgcgc
atcgtcgattcgaccggtgcgctggagttgcgccagatgccgaagaagatgctggtgatc
ggcggtggcatcatcggtctcgagatggcgacggtgtacagcgcgctgggtgccgaaatc
gacgtcgtcgaaatgctcgatggcctgatgcagggcgcggaccgcgatctcgtcaaggtc
tgggagaaaatgaacgccaagcgcttcggtcgcgtcatgctcaagaccaagaccgtgggt
gccgaagccaagcccgacggcatttatgtgaaattcgaaggcgaatccgcaccggccgag
ccgcaacgctacgacctcgtgctcgtcgcggtgggccgcagcccgaacggcaagaagatc
ggcgcggagaaggcgggcgtggcggtgggcgatcgcgggttcatttccgtcgacaagcaa
atgcgcaccaacgtgccgaacattttcgccatcggcgatatcgtcggccagccgatgctc
gcgcacaaggcggtgcatgaggcgcacgtggctgccgaggcggcagcgggtgagaaggct
tacttcgatgcgatccagattccctcggtcgcgtacaccgatccggaagtggcctgggct
ggcaagaccgaggatcagttgaaagccgaaggtgtgaagtacggcaaggccgtgttcccg
tgggcggcgtcgggccgcgcgatcgcgaacggccgcgacgagggcttcaccaaggtgctg
ttcgacgaagaaacccatcgcatcgttggcggcgcgatcgtcggcacccatgcgggcgat
ctgatcggcgagctttgcctggcggtcgagatgggcgccgacgcggtcgacatcggcaag
acgatccatccgcatccgacgctggccgaatcggtcggcatggccgcggagatctatgaa
ggggtgtgcaccgatgtgccgcctgctcgcaagaagtga
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