Pandoraea pnomenusa RB38: DA70_00115
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Entry
DA70_00115 CDS
T03067
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00220
Arginine biosynthesis
ppno00240
Pyrimidine metabolism
ppno00250
Alanine, aspartate and glutamate metabolism
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DA70_00115 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DA70_00115 (carB)
00220 Arginine biosynthesis
DA70_00115 (carB)
Enzymes [BR:
ppno01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DA70_00115 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AHN73033
LinkDB
All DBs
Position
complement(3568453..3571695)
Genome browser
AA seq
1080 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILINSNPATIMTDPDT
ADVTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGASP
EAIDKAEDRQKFKDAMTKIGLGSAKSGIAHSMEDALAVQAQIMAETGGSGYPMVIRPSFT
LGGSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEFEMEVVRDRADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLTDKEYQLLRNASLAVLREIGVETGGSNVQFSINPKDG
RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPTID
YVVTKVPRFAFEKFREADARLTTQMKSVGEVMAMGRTFQESFQKAMRGLEVGVDGLDEKS
TDRDEIVAEIGEPGPDRIWYVGDAFRIGMSLEEVYAETAIDPWFLAQLEDIVKKEKALAG
RTLESLSTEELRFLKQSGFSDRRLAKLLDTDQTAVRRARIAQKVRPVYKRVDTCAAEFST
NTAYMYSTYEEECEAQPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMV
NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDLEKPAGVIVQYGGQTPLKLALDLEANGV
PIVGTSPDMIDAAEDRERFQKLLNDLGLRQPPNRTARAEDEALKLASEIGYPLVVRPSYV
LGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLDDAIECDVDCISDGTDVYIGGVM
EHIEQAGVHSGDSACSLPPYSLSAETVAELKRQTAAMARALNVIGLMNVQFAIQQGNGVD
TIYVLEVNPRASRTVPYVSKATGRQLAKIAARAMVGQSLTSQNVTTEVVPPYFSVKEAVF
PFVKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAAGSRLPASGTVLLTVKDADKP
RAVEVARMLHALGYPIVATRGTAAAIEAAGIPVRVVNKVKDGRPHIVDMIKNGEIALVFT
TVDETRTAIADSRSIRMSAQAHKVTYYTTISGARAAVEGLKYLQNLEVYDLQGLHASLPN
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgcacagacatcaagagcatcctcattatcggcgccggcccgatcatcatc
ggtcaggcatgcgagttcgattattccggcgcacaggcctgcaaggccctgcgcgaggaa
ggctacaaggtcattctgatcaacagcaacccggccacgatcatgaccgacccggatacg
gccgatgtgacctacatcgaaccgatcacgtgggaagtcgtcgagcgcatcatcgccaag
gagcgcccggacgcgatcctgccgacgatgggcggccagaccgcgctgaactgcgcgctc
gacctgcaccgccacggcgtgctcgaaaagtacaaggtggaactcatcggcgcgtcgccc
gaagccatcgacaaggccgaagaccgccagaagttcaaggacgcgatgaccaagatcggt
ctcggttcggccaagtcgggcatcgcccactcgatggaggacgccctggccgtgcaggcc
cagatcatggccgagaccggcggcagcggctatccgatggtgatccgtccgtcgttcacg
ctcggcggctcgggcggcggcattgcctacaaccgcgaggaattcgaagagatctgcaag
cgcggtctcgacctctcgcccacgcgcgaactcctcatcgaggagtcgctcctcggctgg
aaggagttcgagatggaagtcgtgcgcgatcgcgccgataactgcatcatcgtctgctcg
atcgaaaacctcgacccgatgggcgtgcacaccggcgactcgattaccgtcgcccccgcg
caaacgctcaccgacaaggaataccagttgctgcgcaacgcgtcgctcgccgtattgcgc
gagatcggcgtggagacgggcggctcgaatgtccagttctcgatcaacccgaaggacggc
cgcatggtcgtcatcgagatgaacccccgtgtgtcgcgctcgtcggcgctggcctcgaag
gccaccgggttcccgatcgcgaaggtcgccgccaagctcgccgtgggctatacgctcgac
gaactgcgcaacgaaatcaccggcggcgccacgccggcttcgttcgagccgaccatcgac
tatgtcgtgaccaaggtgccccgtttcgccttcgagaagttccgcgaagccgacgcccgc
ctgaccacgcagatgaagtcggtcggggaagtgatggccatgggccgcacgttccaggaa
tcgttccagaaggccatgcgcggtctggaagtcggcgtggacggtctggacgagaagtcg
accgatcgcgacgagatcgtggccgaaatcggtgaaccgggcccggaccgcatctggtac
gtcggcgacgcgttccgcatcggcatgagcctcgaggaggtctacgccgagacggccatc
gacccgtggttcctcgcccagctcgaagacatcgtcaagaaggaaaaggcgctcgccggc
cgcacgctggagagcctgtcgaccgaagaactgcgcttcctgaagcaaagcggtttctcc
gatcgccgcctggccaagctgctggataccgaccagaccgccgtgcgccgcgcgcgcatc
gcgcagaaggtgcgcccggtctacaagcgcgtggacacgtgcgcggccgaattctcgacc
aataccgcttacatgtactcgacctatgaggaagagtgcgaagcccagccgaccaacaag
aagaagatcatggtgcttggcggcggcccgaaccggatcggtcagggcatcgagttcgat
tactgctgcgtgcacgcggcgctcgcgctgcgcgaggacgggtacgagaccatcatggtc
aactgcaacccggaaacggtgtcgacggactacgacacgtccgatcgtctgtacttcgaa
ccggtgacgctcgaggacgtgctggaaatcgtcgacctcgagaagccggccggcgtgatc
gtgcagtacggcggtcagacgccgctgaagctcgcgctcgatctcgaggcgaacggcgtg
cccatcgtcggcaccagcccggacatgatcgatgccgcggaagaccgcgagcgtttccag
aagctgctcaacgacctcggtctgcgtcaaccgcccaaccgcacggcgcgcgccgaggac
gaagccctgaagctggcctcggaaatcggctatcccctggtcgtgcgtccgtcgtacgtg
ctgggtggccgcgcgatggaaatcgttcacgagccgcgtgacctcgagcgctacatgcgc
gaagccgtcaaggtgagcaacgatagccccgtgctgctcgaccgcttcctggacgacgcc
atcgaatgtgacgtcgactgcatctcggacggtaccgacgtgtatatcggcggcgtgatg
gagcacatcgaacaggccggcgtgcactcgggcgactcggcctgctcgctgccgccgtac
tcgctgtcggccgaaacggtcgccgagctcaagcgccagacggccgcgatggccagggcg
ctcaacgtgatcggcctgatgaacgtgcagttcgcgattcagcagggcaatggcgtggat
acgatctatgtgctcgaagtgaacccgcgtgcctcgcgtacggtgccgtacgtctcgaag
gccaccggccgtcagctggccaagatcgccgcgcgcgccatggtcggccagtcgctcacg
tcgcagaacgtgacgaccgaggtcgtgccgccgtatttcagcgtgaaggaagcggtgttc
ccgttcgtgaagttcccgggggtcgacccggtgctcggaccggaaatgcgctcgaccggc
gaagtgatgggcgtgggccgcacgttcggcgaagcgctcttcaagtcgcaactggcggcc
ggctcgcgcctgccggcctcgggcacggtgctgctcaccgtcaaggacgccgacaagccg
cgtgccgtcgaggtcgcccgcatgctgcacgcgctgggttacccgatcgtggcaacgcgc
gggaccgcggcggcgatcgaagccgccggcatcccggtgcgcgtggtcaacaaggtgaag
gatggccgtccgcacatcgtcgacatgatcaagaacggcgaaatcgcgctggtattcacc
acggtggatgaaacgcgcacggccatcgccgactcgcgctcgatccgcatgtcggcgcag
gcacacaaggtcacgtactacacgaccatctcgggcgcccgcgccgcggtggaaggcctg
aaatacctgcagaacctcgaggtctacgatctccaggggcttcacgcctcgctgccgaac
tga
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