Pandoraea pnomenusa RB38: DA70_00665
Help
Entry
DA70_00665 CDS
T03067
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03030
DNA replication
ppno03410
Base excision repair
ppno03420
Nucleotide excision repair
ppno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DA70_00665
03410 Base excision repair
DA70_00665
03420 Nucleotide excision repair
DA70_00665
03440 Homologous recombination
DA70_00665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppno03032
]
DA70_00665
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_00665
Enzymes [BR:
ppno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DA70_00665
DNA replication proteins [BR:
ppno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DA70_00665
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DA70_00665
NER (nucleotide excision repair)
GGR (global genome repair) factors
DA70_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AHN73128
LinkDB
All DBs
Position
complement(3448218..3450956)
Genome browser
AA seq
912 aa
AA seq
DB search
MSEQQSLEGKTLLLVDGSSYLYRAYHALPDLRGPNGEPTGALHGIVNMLRRMRKDVHAEY
SACVFDAKGKTFRDDWYPEYKAHRPAMPDDLRAQIEPIHEAVRAMGWPLLMIDGVEADDV
IGTLARQAVARGMRVVVSTGDKDLAQLVNENVTLVNTMTNETLDIAAVTAKFGVPPERIV
DYLTLVGDTVDNVPGVEKCGPKTAVKWLTQYGDLDNLVANAEQVKGAVGENLRRALDWLP
MGRKLVTVAVDCDLAPQVTSIEASLQTQPEDAETLRDFFARHGFKTLLREAQTAVAAQAG
EAAPAPVADTIEREYDAVLTWAQFDAWLKIIEAAELTAFDTETTSLDAMQAQLVGLSFSC
EPGRAAYIPVAHRAPGEVEQLPRDEVLARLKHWLESPDHKKVGQNLKYDAHVLENYGIEL
GGIAHDTLLESYVLESHRNHDMDSLASRHLGVTTVKYEDVCGKGAKQIGFDEVSVERATE
YAAEDADITLRLHRALYPDVAREATLEFVYANIEMPTARVLQRMERNGVLVDTARLAAQS
DEIGHKLIALEAEAFTLAGQQFNLNSPKQIGDIFFTQLQLPVVKKTASGAPSTDEEVLQK
LAEDYPLPKVLLEYRGLAKLKSTYTDKLPRMVNPSTGRVHTNYAQAVAITGRLASNDPNL
QNIPVRTPEGRRIREAFVAPPGSQLVSADYSQIELRIMAHISGDESLLRAFANGEDIHRA
TAAEIFAVTPLEVSSEQRRYAKVINFGLIYGMSAFGLAANLGIERDAAKQYIDRYFMRYP
GVARYMDETRKSAKARGYVETVFGRRLWLPDINGGNGPRRQAAERAAINAPMQGTAADLI
KLSMIAVQRWLDDSGMQTRQIMQVHDELVLEVPDHELAEVRKRLPELMCGVAKLRVPLVA
EVGVGENWEQAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacagcaaagtctggaaggtaagacgctcttattggtcgatggttcgagttat
ctgtatcgagcctatcacgccctgccggatttgcgcggccccaacggtgaacccaccggg
gcccttcacggcatcgtcaacatgctgcgccgcatgcgtaaagacgtacacgcagagtat
agcgcctgcgttttcgacgccaagggcaaaacgtttcgcgacgattggtaccccgaatac
aaggcgcatcgaccggcgatgcccgacgatctgcgtgcgcagatcgagcccattcacgag
gccgtgcgcgccatgggctggccgctgctgatgatcgacggcgtggaagccgatgacgtc
atcggcaccctggccaggcaggccgtcgcgcgcggcatgcgcgtggtcgtctcgaccggc
gacaaggatctggcgcagctcgtcaacgagaacgtgacgctcgtgaacacgatgaccaac
gagacgctggacatcgccgccgtgaccgcgaagttcggcgtgccgcccgagcgcatcgtc
gactacctgaccctcgtgggcgataccgtggacaacgtgccgggggtcgagaagtgcggc
cccaagacggccgtcaaatggctcacgcagtacggcgatctcgacaacctcgtggccaat
gcggagcaggtcaagggcgcggtcggcgagaacttgcgccgcgcgctggactggctgccg
atgggccgcaagctcgtgacggtcgcggtcgattgcgatctcgcccctcaggtcacctcc
atcgaagccagcctccagacccagcccgaagatgccgagacgttgcgcgacttcttcgcg
cgccacggcttcaagacattgctgcgtgaagcgcagaccgcggtagcggcccaggccggc
gaggcggcaccggcgccggtggccgacaccatcgaacgagaatacgacgccgtgctcacg
tgggcgcagttcgacgcgtggctcaagatcatcgaggccgccgaactcacggcattcgac
accgagacgacgtcgctcgacgcgatgcaggcgcagctcgtcggcctgtcgttctcatgc
gagccgggacgcgcagcatacattcccgttgcccaccgcgcgccgggcgaagtcgagcaa
ttgccgcgcgacgaagtgctcgcgcgcctgaagcactggctggaaagtccggaccacaag
aaggtcgggcagaacctgaagtatgacgcgcacgtgctggagaattacggcatcgagttg
ggcggtatcgcccacgacacgctgctcgagtcgtacgtgctcgagtcgcatcgcaatcac
gacatggacagcctcgcgtcgcgccatctgggtgtgacgacggtgaagtacgaggacgtg
tgcggcaagggcgccaagcagatcgggttcgacgaagtgagtgtcgagcgcgcgaccgag
tacgccgccgaggacgccgacatcacgctgcgcctgcatcgtgcgctctaccccgatgtc
gcgcgcgaggccacgctcgaattcgtctatgccaatatcgagatgcccaccgcgcgcgtg
ctccagcgcatggagcgcaacggcgtgctcgtcgatacggcgcgcctggccgcgcagagc
gacgaaatcggccacaagctcatcgcgctcgaagccgaggcgttcacgctcgccgggcag
cagttcaatctgaactcgcccaagcagatcggcgacatcttcttcacgcagttgcagttg
cccgtcgtgaagaagacggcgagcggcgcgccgtcgaccgatgaagaagtacttcagaag
ctggccgaggattacccgctgccgaaggtgctgctcgagtatcgaggtctggccaagctc
aagtcgacgtatacggacaagctgccgaggatggtcaatccgtcgactggccgggtccac
acgaactacgcgcaagccgtggcgatcaccgggcgtctggcatcgaacgatccgaacctg
cagaacattccggtgcgcacccccgagggccggcgcattcgcgaggcattcgtggcacct
ccgggcagtcaactggtttcggccgactactcgcagatcgagctgcgcatcatggcgcac
atctcgggcgacgaaagcctgctgcgcgcgttcgccaacggcgaagacattcaccgtgcc
accgcggccgagatcttcgccgtcacgccgctggaggtatcttccgagcagcgccgctac
gccaaggtcatcaacttcggtctgatctacggcatgagcgcgttcggactggcggcgaac
ctcggtatcgagcgcgatgccgccaagcaatacatcgaccgctacttcatgcgatatccg
ggtgtggcgcgttacatggacgagacacgcaagagcgccaaggcgcgcggctacgtggag
acggtcttcgggcgccgcctgtggctgccggacatcaacggtggcaacggcccgcgccgt
caggcggccgagcgcgctgccatcaatgcgcccatgcagggaacggccgccgacctcatc
aagctgtcgatgatcgccgtgcagcgctggctggacgacagcggcatgcagacgcgtcag
atcatgcaggtgcacgacgaactggtgctcgaggtgcccgatcacgaattggcggaagtt
cgcaagcgcttgccggagctgatgtgtggcgtggcgaagcttcgcgtgccgctcgtggcc
gaagtcggcgtgggcgagaactgggagcaggcgcactga
DBGET
integrated database retrieval system
