Pandoraea pnomenusa RB38: DA70_00875
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Entry
DA70_00875 CDS
T03067
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppno03000
]
DA70_00875
Transcription factors [BR:
ppno03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DA70_00875
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
AHN73167
UniProt:
A0A378YG76
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All DBs
Position
complement(3401043..3401966)
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AA seq
307 aa
AA seq
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MDLNQLNFNHLYYFWRVAKLGHLTRAAERLHTSQSAVSAQIRQLEEKIGDDLFVRAGRRL
TLTDTGQLVLAYADNIFGLGEELLGRLHGRSAGVTRLRVGSVATLSRNYQENWIRPLLTN
PAVVLTLESGLMEGLLTRLIQHQLDVVLANETVPADPDRPLHCQFLGSQAISLVGPASVW
ASKTLRIPEDLDDVDIVLPGPRHALRGQFDALCATAGVSPRLRAEVDDMAMLRLIARDSG
WLTVLPEVVVQDELRTGSLVVVGQSTALQEHFYAITAPRRHRIEVLEPLLAGKRDVHNEV
ARKTSAS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggacctcaatcaactcaatttcaatcatctctactacttctggcgcgtggccaagctc
ggccatctgacgcgtgcggcggagcggttgcatacctcgcaatcagccgtctcggcgcag
attcgtcagttggaggagaagatcggcgacgatctgtttgtccgggcaggacggcgactc
acgttgaccgataccgggcagttggtgctggcgtacgccgacaacattttcgggctgggc
gaggagctgttgggacgcctgcatgggcgctctgcgggcgttacgcgcttgcgcgtcggc
agcgtggccacactgtcgcgcaactatcaggagaactggattcgacctttgctcaccaac
ccggccgttgtgctgacgctcgaatcggggttgatggaagggctgctgacccggctcatc
cagcatcaactcgacgtcgtgctggccaacgagacggtgcccgccgatccggatcggcca
ttgcactgccagttcctgggcagtcaggcaatctcgctcgtggggcctgccagcgtatgg
gcgtcgaaaaccctgcggatcccggaagatctcgatgacgtcgacatcgtgctgcccggc
ccacgccacgcgttgcgcggtcaattcgacgcgctttgcgccacggcaggtgtcagtccc
agactgcgcgctgaagtggacgacatggcgatgcttcgcctgattgcccgcgacagtggg
tggctgaccgtcttgcccgaagtggtcgtgcaggatgagctgcgaaccggatcgctcgtc
gtggtggggcaatcgactgcgctgcaggagcatttctacgccattacggcgccaaggcga
catcgcatcgaagtgctggagccattgctcgccggcaagcgcgacgtccacaacgaggtc
gcccgcaaaacctccgcgagctag
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