Pandoraea pnomenusa RB38: DA70_00895
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Entry
DA70_00895 CDS
T03067
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_00895
Enzymes [BR:
ppno01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
DA70_00895
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
DA70_00895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AHN73171
LinkDB
All DBs
Position
complement(3396659..3398212)
Genome browser
AA seq
517 aa
AA seq
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MHADTEPPTHTLRLVLGDQLHPGHRWYSRVDPAVVYVLMEVRQETDYVLHHAQKIIAIFA
AMRDFARHLRAEGHRVRYVALDHPSNCQSITENLAALADHYGARRVEWQQPDEWRLDAQL
NSWGMSQPLDWAVVDSEHFLTPRDALASLMGERKQWLMEHFYRNMRRRWHLLLDADGGPQ
GGRWNFDSDNRKRWPGTPPEPTDWRPRHDHRALWQMLQRAGVRSFGDPQADAMRWPVNRT
EALACLEAFITQALPHFGDYEDALAAGAPRLFHSLLSFALNVKMLHPLEVVRRAEAAYAA
GRAPLAAVEGFVRQIAGWREYVRGIYWAKMPDYASHNVLNHETPLPDWFWNGNTRMRCLH
LAITQSLQTAHAHHIQRLMVIGNFALLARLDPQALHRWYLGIYIDAFEWVELPNTLGMSQ
RADGGLIATKPYVSSAAYLRRMGDYCQGCAYDPTQKTGARACPFNALYWDFFDHHAPTLQ
DNPRLAIVFRQWQKMDDAQREALRAHAAKLRERLDTL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccgataccgaaccaccgactcataccctgcgcctggtgctgggagaccaattg
cacccgggccatcgctggtattcccgggtggacccagcggtcgtctacgtattgatggaa
gtgcggcaggaaaccgactacgtgctgcaccatgcccagaagatcatcgccatattcgcc
gcgatgcgtgactttgcccggcacctgcgcgccgaagggcatcgtgtgcgctacgtggca
ctggaccatccgagcaattgtcaatccatcacggaaaatctggcggcactcgccgatcac
tacggcgcccgccgggtcgagtggcaacagccggacgaatggcgactggacgcgcaactc
aacagttgggggatgtctcagcccctggactgggcggtggtggacagcgaacatttcctg
acgccgcgtgacgcgcttgcctcgctcatgggcgagcgcaagcagtggttgatggagcac
ttctaccggaacatgcgccggcgctggcatttgctgctcgatgccgacggcggcccgcaa
ggcggtcggtggaatttcgactcggacaaccgcaagcgctggccgggaacgccgccagag
ccgacggactggcgcccgcgacacgatcaccgggcgctgtggcaaatgctgcagcgcgca
ggcgtgcgcagcttcggcgatcctcaggccgacgcgatgcgctggccggtcaaccgcacg
gaggcgctggcctgccttgaggctttcatcacacaggcgctgccgcacttcggcgactac
gaggatgcattggccgccggcgcgccgcgcctgttccattcgcttctgtcgttcgcgctc
aacgtcaagatgctgcatcccctggaagtggtgcggcgtgcggaggctgcctacgctgcg
ggccgggcgccgcttgccgcggtggaaggcttcgttcggcagatcgcggggtggcgagaa
tacgtgcgcggcatttactgggcgaagatgcccgactacgcgtcgcacaacgtcctgaat
cacgagacccccttgccggactggttctggaacggcaacacccgcatgcgctgtcttcac
ctagccattacgcagtccctgcaaaccgcgcatgcacaccatatccaacggctcatggtg
atcggcaatttcgccttgctggcccgactcgacccgcaggcgctgcaccgctggtatctg
ggcatctacatcgacgcattcgagtgggtggagctgccgaacacacttggcatgagccag
cgcgccgatggcggactgattgccacgaaaccctatgtgagcagtgctgcctacctgcgg
cgaatgggcgattactgccagggctgcgcttacgatcccacgcaaaaaactggcgcgcgc
gcatgtccgttcaacgccctttactgggatttctttgaccaccatgcgcccacgctgcag
gacaacccgcgccttgcgatcgttttccgccagtggcaaaagatggacgacgcgcagcgc
gaggcgctacgtgcgcatgccgcgaagttgcgcgagcgactggacaccttgtaa
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