Pandoraea pnomenusa RB38: DA70_02470
Help
Entry
DA70_02470 CDS
T03067
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppno03009
]
DA70_02470 (rimO)
Enzymes [BR:
ppno01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DA70_02470 (rimO)
Ribosome biogenesis [BR:
ppno03009
]
Prokaryotic type
ribosomal protein modification factors
DA70_02470 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AHN73442
UniProt:
A0A378YDW9
LinkDB
All DBs
Position
complement(3053804..3055171)
Genome browser
AA seq
455 aa
AA seq
DB search
MSRPSPAGTPKVGFVSLGCPKALVDSEQILTQLRAEGYDIAGTYDGADLVVVNTCGFIDD
AVQESLDAIGEALAENGKVIVTGCLGAKKDAAGQDIVSAVHPKVLAVTGPHAVGEVMSAV
HTHLPKPHDPFTDLVPPAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPVAEV
MLEAENLFKAGVKELLVISQDTSAYGVDVKYRTGFWAGRPLKTRMTELVTALGELARQYG
AWVRLHYVYPYPHVDEIIPLMAEGHILPYLDVPLQHAHPDVLKRMKRPASGEKNLERIQA
WRKMCPDLTIRSTFIAGFPGETEAEFEYLLDFLREAELDRVGCFAYSPVEGAKANELAGA
LPDEVREERRARFMEVAEEISAQRQQRKVGTTLQVIVDEINQDGGVARSAADAPEIDGLV
YIEPTAKAAKRLKVGEFVNVTVTGADGHDLWGEVV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccatcgcccgccggcacccccaaagtcggcttcgtttcgctcggctgcccc
aaggccctggtcgactccgagcagatcctgacgcaattgcgcgccgaaggttacgacatc
gccggtacctatgacggtgccgacctcgttgtggtcaacacctgcggtttcatcgacgac
gccgtccaggaaagcctcgatgcgatcggcgaagcactcgccgaaaacggcaaggtcatc
gtgaccggttgcctgggcgccaagaaagacgccgccggtcaggacatcgtgagcgcggtg
cacccgaaagtgctcgccgtgaccggtccgcacgccgtgggcgaagtcatgagcgcggtg
cacacacacctgcccaagccgcacgatccgttcaccgatctcgtgccgcccgcgggcatc
aagctcacgccgcgtcattacgcgtatctgaagatttccgaaggctgcaaccatcgctgc
acgttctgcatcattccgtcgatgcgcggcgatctcgactcgcgcccggtcgcggaggtg
atgctcgaggccgaaaacctgttcaaggcgggagtcaaggagttgctggtgatctcgcag
gacaccagcgcctacggcgtcgatgtgaagtaccgtaccgggttctgggccgggcgtccg
ctcaagactcgcatgaccgaactggttacggcgctgggagagttggccaggcagtacggc
gcgtgggtgcgtctgcactacgtctatccgtacccgcacgtcgacgagatcatcccgctg
atggccgaaggccatatcctgccgtatctcgacgtgccgcttcaacacgcgcatcccgac
gtgctcaagcgcatgaagcgcccggcctcgggcgagaaaaatctcgagcgcatccaggcg
tggcgcaagatgtgtccggacctcacgatccgcagcacgttcatcgccgggttcccgggc
gaaacggaagccgaattcgaatacctgctggacttcctgcgcgaagccgaactcgatcgc
gtgggttgcttcgcctactcgccggtcgagggcgcgaaggcgaacgagctggcgggcgcc
ctgcccgacgaagtgcgcgaggagcgccgcgcgcgcttcatggaggtggccgaggagatt
tcggcgcaacgccagcagcgcaaggtcggcacgaccctccaggtaatcgtcgacgaaatc
aatcaggatggcggcgtggcccgctccgcggcggacgccccggaaatcgacggcctcgtg
tacatcgaacccaccgcgaaggccgcgaagcgcctgaaggtcggcgaattcgtgaacgtg
actgtgaccggcgccgacggtcacgacctgtggggcgaggtcgtctga
DBGET
integrated database retrieval system
