Pandoraea pnomenusa RB38: DA70_02795
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Entry
DA70_02795 CDS
T03067
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00061
Fatty acid biosynthesis
ppno00071
Fatty acid degradation
ppno01100
Metabolic pathways
ppno01212
Fatty acid metabolism
ppno02024
Quorum sensing
ppno04146
Peroxisome
Module
ppno_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DA70_02795
00071 Fatty acid degradation
DA70_02795
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DA70_02795
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA70_02795
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppno01004
]
DA70_02795
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppno04147
]
DA70_02795
Enzymes [BR:
ppno01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DA70_02795
Lipid biosynthesis proteins [BR:
ppno01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DA70_02795
Exosome [BR:
ppno04147
]
Exosomal proteins
Exosomal proteins of breast milk
DA70_02795
Exosomal proteins of breast cancer cells
DA70_02795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AHN73495
LinkDB
All DBs
Position
2974726..2976525
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AA seq
599 aa
AA seq
DB search
MDQAVAQARVWLRAYPPGVPADIDVTRYTSLVQAFDEWIDKYRERVAFVSLGSEMTYAEV
ARQAHAFAAWLQSQGVRKGERVALMMPNCFQYPICLFGTLIAGGVVVNVNPLYTVRELKH
QLVDSGARTLVVFENFAKTAQDAIAGTDVQQVLVTQIGDLLAPGANLKGRAVNFLMRHIG
RQVPPYDLPQAIPLRRALAQGAKHAPTPVPLMRDDLAFLQYTGGTTGVAKGAMLTHGNVL
ANLLQTEAWAADQLNGDIEVNLSLLPMYHILSLTVNCLIFMSLGGRNILIANPRDVKKVV
YIIRNETFTGVTGVNTLFNGLLENADFCARDFSKLKLSLAGGMATQRAIAERWREVTGKP
IIEGYGLTECSPIVTMNPVDLAHMDTFEFTGSIGLPAPSTEVRFRREDGTWADLGEPGEL
CVRGPQVMRGYWRRPEETASTIDADGWLMTGDIGVMDERGYVRLIDRKKDMILVSGFNVY
PNEIEDVVMLHPGVREAAVVGVPDPIAGERVKLVVVARDPQLDADAILAHCRAHLTAYKV
PRIVEFRQGELPKTTVGKILRRELRGTHDESHSRAAHATTAPSDGRDSHAPTPANQGDK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagccgtagcgcaggcgcgcgtctggttgcgtgcctacccacccggcgtgccc
gccgatatcgacgtgacacgttacacgtcgctcgtgcaggcgttcgacgagtggatcgac
aagtaccgcgaacgcgtcgcgttcgtgagcctcggcagcgaaatgacatacgcggaagtg
gcgcgtcaggcccatgcgttcgcggcgtggctgcaatcgcagggcgtgcgaaaaggcgag
cgcgtcgccttgatgatgccgaactgctttcaataccccatctgccttttcggcacgctc
atcgcgggcggggtcgtcgtcaacgtcaatccgttgtacacggttcgcgaactgaagcat
caactggtcgacagcggcgcgcgcaccctcgtcgtgttcgagaacttcgcgaagaccgct
caggacgcgattgccggcaccgacgtgcagcaggtcctcgtgacacagatcggcgatctg
ctcgcccccggcgccaatctgaagggacgcgccgtcaacttcctcatgcgacacatcggc
aggcaggtccccccctacgatctgccgcaggcgatcccgctgcgtcgcgcgctcgcgcag
ggcgcgaaacatgcgccgacgcccgtgccgctcatgcgcgacgatctcgcattcctccag
tacacgggcgggacgaccggcgtggccaagggggcaatgctcacccatggcaatgtgctc
gccaacctgttgcaaaccgaagcgtgggctgccgatcagctcaacggcgacatcgaggtg
aacctttcgctgttgccgatgtatcacatcctctcgctcacggtgaactgcctcatcttc
atgagcctgggcgggcgcaacatcctcatcgcgaatccacgcgacgtgaagaaggtcgtg
tacatcattcgcaacgagaccttcaccggcgtgaccggcgtgaacacgctcttcaacggc
ttgctcgaaaacgccgacttctgcgcgcgcgacttctcgaagctcaagctctcgctcgcg
ggcggcatggccacgcagcgcgccattgccgagcgctggcgtgaggtgaccggcaagccg
atcatcgagggctacgggctgaccgaatgctcgccgatcgtcacgatgaacccggtcgat
ctcgcccatatggacacgttcgaattcaccggctccatcggactgccggcgccgtcgacc
gaagtcaggtttcggcgcgaagacggcacgtgggccgatctcggcgagccgggcgagctg
tgcgtgcgcggcccgcaggtcatgcgcggctactggcggcgccccgaggagaccgccagc
accatcgatgccgacggctggctgatgaccggcgacatcggcgtgatggacgagcgcggc
tatgtgcggctcatcgatcgcaagaaggacatgatcctcgtgtcgggcttcaacgtctat
ccgaacgagatcgaagacgtcgtcatgctccaccccggggtgcgcgaggcggcagtcgtg
ggcgtgcccgacccgatcgcgggagagcgcgtgaaactcgtggtcgtggctcgcgatccg
cagctcgatgccgatgcgatcctcgcgcactgccgcgcacacctgaccgcctacaaggtg
ccgcgcatcgtcgaattccgccagggcgaactgcccaagacgaccgtgggaaagattctg
cggcgcgaactgcgcggcacgcatgacgaaagtcactcgcgcgctgcgcacgccacgacc
gcaccgagcgacgggcgcgactcgcacgcgccgacacccgcgaaccagggagacaaatga
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