Pandoraea pnomenusa RB38: DA70_03160
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Entry
DA70_03160 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K07677
two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:
2.7.13.3
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DA70_03160
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppno01001
]
DA70_03160
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppno02022
]
DA70_03160
Enzymes [BR:
ppno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
DA70_03160
Protein kinases [BR:
ppno01001
]
Histidine kinases
NarL family
DA70_03160
Two-component system [BR:
ppno02022
]
NarL family
RcsC-RcsD-RcsB (capsule synthesis)
DA70_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
Response_reg
Hpt
PAS_8
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
AHN77307
LinkDB
All DBs
Position
complement(2886650..2890024)
Genome browser
AA seq
1124 aa
AA seq
DB search
MTRDIAIAGRLLRIGGLLALLFGLSVWVAAVSYALFGTLWQSGQKTESFFAAVGREIRDL
EIFNEQARAMAQATQASRVRQGGATRALTDRILQPLLGMSPGSARRISGVGWDSEFEIVK
LADITPERAALYARLTLRLMVLDANFWSPLDGQDETFIISADGAFAAYRPAIGRASFTPS
KLASDTQAMIAEINKVERYHARIRGNSEGPFWTYNYEHPVTHLKTVSSFVPIRDLDGHLV
LYVGTSMSPDMIVPPRMRNLERSGEALQLISEDGLIIASAGQPLASLGNLRTLVTLPLFG
GAQMTLRSDGQRLVFERRLSSTPWFVRYAVRPKELLRENATLLLGATLLLCLYAAGVFAG
MRYMRQRIIEPARQRTKALLERDAFTQTLIETAPVGMAIIDPFEPAVVMSNPAYAGTVDL
LRHLGDGELTRMYRQLHSGVVARPVRRLLSAMDDAGERHYAVSFVDTVFREQPVLIGTLS
DVTEQRRFELEQRKARLAAESANRAKDVFLTTVSHEMRTPLYGTLASLELLSAQNLGDDH
RYYVDVMESSTRNLLDLINDLLDYSRIQVGRFELNSRDGSLLKELEAVGLSFTGRARLQG
LTLDWMIDPQLSRAVHTDALRLGQVVTNLVGNAIKFTDKGHVAFSAMITRADMQGCDVAF
AVSDSGVGIAAADLADLFKPFGKSTTEPGMQHGTGLGLAISHQFVGMLGGVLQVDSKEGE
GTTMRFTLRLPWAPDSEAPAVVAAGETFAYVSALPRRHWYLEALIRRAGYEPMQYSDAVT
WSTGSGRSQDAGLLLFADEWPVRGMAGAQVYLLRATPVDRPAGSMPAWPKDIALLQQAEL
WEALGAVPRRGHAASGGVQDAAHAQTRVRPLAGWYVLVADDHPISGMLLSRQLEGLGAMV
DCYHDPREALDAFDAESHMLVITDANMPHVSGHALATAIKSRAPHVPVVVATADVTLRHD
RDARSPYDAVVYKPVDARSLLRVIELVRTRYPSLCVDIAPLADSARQVESALEPAPAPEP
AVARDWRLPLSDMLDTFVKIADQDIANCRAALTELSRETLRHSAHRLRGGFMAFGLSSLA
SLAAQLEHLAPQASAGQMEAAFDALDVAWNDWLRAQGHAIASHA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtgacatcgcgatcgccggccgcctgctgcgtatcggcggcctgctcgcactt
cttttcggcttgtcggtctgggtggcggcggtctcgtacgcgttgttcggcaccttgtgg
caaagcggccagaagaccgagtccttcttcgccgccgtcggccgtgaaattcgcgacctc
gagatcttcaacgagcaggcccgtgccatggcgcaagccacccaggccagcagggtgcgt
caaggcggggccacgcgggcattgaccgatcgcattctgcagccgctgctcggcatgagc
cccggcagcgcacgccgtatcagcggcgtgggatgggacagcgagttcgagatcgtcaag
ctggcggacattacccctgaacgtgccgccctgtatgcgcgcctgacgctgcgactcatg
gtgctcgacgccaacttctggagtcccctcgacggtcaggacgaaacgttcatcatttcc
gcggatggcgcctttgcggcctatcgaccggcgatcggacgcgcgtcgttcacgccgtcg
aagctggcgagcgacacgcaggcgatgatcgccgagatcaacaaagtggagcgctatcac
gcgcgcatcaggggcaacagcgaaggtccgttctggacttacaactacgagcatcccgtc
acccatctgaagaccgtatcgagcttcgtaccgattcgcgatctggatggccacctggtg
ctctacgttggcaccagcatgtcgccggacatgatcgtgccgccgcgcatgcgcaatctg
gaacgctcgggggaagcgctgcaactgatctcggaagacgggctcatcattgcaagtgca
ggccagccgctcgcctcgctgggcaatctgcgaacgcttgtgacattgccgctcttcggg
ggcgcgcagatgacgctgcgctccgacggtcagcgcctcgtcttcgagcgtcgcctgtcg
tccacgccctggttcgtgcgctacgcggttcgcccgaaagagctgttgcgcgagaatgcc
acgctgctgctcggcgcaaccctcctgctgtgtctctacgcggcgggcgtgttcgccggg
atgcgctacatgcgacagcgcatcatcgaaccggcgcgccagcgcacgaaagcgctgctc
gagcgcgacgccttcactcagaccctcatcgaaaccgcgccggtcggcatggcgatcatc
gaccccttcgagccggccgtggtcatgagcaatccggcgtatgccggcaccgtcgatctg
ttgcgtcatctcggcgacggagagctcacgcgcatgtatcggcagttgcacagcggcgtg
gtcgcgcgccccgtgcgacgcttgctcagtgcgatggacgacgcgggagagcgccactat
gccgtgagtttcgtcgacacggtctttcgcgagcagccggtgctgattggcacgctgtcg
gacgtcacggagcaacgccggttcgagctggagcaacgcaaggcgcgcctggcagcggaa
agcgcgaatcgcgcgaaagacgtcttcctgactacggtgagccacgaaatgcgtacgccg
ttgtacggcacgctggcgtcgctggagctcttgagtgcgcagaacctgggcgacgatcat
cgctattacgtcgacgtgatggagagctcgacgcgcaacctgctcgatctcatcaacgac
ctgctcgactactcgcgcattcaggtggggcgcttcgagctgaattcgcgcgacggttcc
ctgctcaaggagctggaggcggtcgggctgtcgtttaccggccgcgcgcgattgcaggga
ctgacgctcgactggatgatcgatccccagttgtcccgcgccgtgcacaccgacgcgctg
cgactcggccaggtcgtcacgaatctcgtcggcaacgcgatcaagttcaccgataagggt
cacgtggcgttcagtgccatgatcactcgcgccgacatgcaggggtgcgacgtcgcgttc
gctgtcagcgacagcggggtcggcattgcggcggcggacctcgccgatttgttcaagccc
ttcggcaaaagcacgacagagccgggcatgcagcacggcaccggactggggctggccatc
tcgcaccagttcgtcggcatgctgggcggcgtgctccaggtcgacagcaaggagggcgag
ggcacgacgatgcgtttcacgctgcgactgccgtgggcacccgacagcgaggcgccggcc
gtcgtcgccgcgggcgaaacgttcgcatatgtcagtgcgttgccccgtcggcattggtat
ctcgaagcgctgattcgtcgtgcgggctatgagcccatgcaatacagcgacgccgtgacg
tggtccaccggcagcgggcgttcgcaggacgcggggttgctcctgttcgccgacgaatgg
ccggtccgggggatggccggcgcgcaggtctacctgctgcgtgcgacaccggtggaccgc
ccggcgggaagtatgccggcatggccgaaggacattgcgttgctgcaacaggcggagctt
tgggaggcgttgggcgcggtgccacgtcgaggacatgcggcatccggtggtgtgcaggac
gccgcccatgcacagacccgcgtgcgaccgctggcagggtggtatgtgctggtcgccgac
gatcatccgatcagcggcatgttgctctcgcgtcaactcgaggggctcggcgcgatggtc
gactgctaccacgatccgcgcgaagcgctcgatgcgttcgacgcggaatcgcacatgctc
gtgatcaccgacgcgaacatgccgcatgtatctggccacgcgctggcgaccgcgatcaag
tccagggcgccgcatgtgccggtcgtggtcgccacggcggatgtgacgctgcgccacgat
cgcgatgccagatcgccctatgacgcggttgtctacaagcccgtggacgcccgttcgctg
cttcgcgtgatcgaacttgtgcgtacacgctacccgtcgctttgcgtcgacattgcccca
ttggcggattcggcgcgtcaggtggaaagcgcgctcgagccggcgccggcgccggagccg
gcggtggcccgggattggcgcttgccgctctcggacatgctcgatacgttcgtgaagatc
gcggatcaggacattgcaaactgccgggcggcgttgaccgaactgtcgcgcgaaacgctg
cggcattcggctcaccggctgcgcggtggcttcatggcgttcggtctgagttcactcgcg
tcgctcgcggcgcagttggaacatctggcgccgcaggcgtcggccggacagatggaggcc
gcgttcgatgcgctcgacgtcgcctggaacgactggcttcgcgcccaggggcacgccatc
gcgagccacgcctga
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