Pandoraea pnomenusa RB38: DA70_04495
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Entry
DA70_04495 CDS
T03067
Name
(GenBank) excisionase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00020
Citrate cycle (TCA cycle)
ppno00630
Glyoxylate and dicarboxylate metabolism
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01120
Microbial metabolism in diverse environments
ppno01200
Carbon metabolism
ppno01210
2-Oxocarboxylic acid metabolism
ppno01230
Biosynthesis of amino acids
Module
ppno_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppno_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ppno_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DA70_04495
00630 Glyoxylate and dicarboxylate metabolism
DA70_04495
Enzymes [BR:
ppno01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
DA70_04495
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GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
HTH_23
Sigma70_r4_2
HTH_8
HTH_29
AbiEi_4
DUF6236
Motif
Other DBs
NCBI-ProteinID:
AHN73800
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Position
2593863..2595068
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AA seq
401 aa
AA seq
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MNYFTAAQAAERLGVSLQTLYAYVSRGLLHAEPGKTHRERRYRVADVERLAAQRTRGRKP
REVAKAALDWGMPVLESSITLIEDGRCYYRGRDALTMAESTSVEATAAWLWQCDEATAFA
AREDRESGPDDWPALLLDRYRGQRAESALLPAFTVASDDTATGIWQRDATRVARGSAELL
RLMTACLLGTTPSDAPVHEQCAHAWGVRDASGADLIRMALVLCADHELNASSFTARCVAS
TGASLRAAVVAGLSALTGGRHGGTTARNEAMWDEVGETHVAARLRERLARGEKLPGFGHH
LYPAGDVRASAMLARVLPSHPTWQTMIEAADTLVGQRPSLDFALVAVRRHLGLPVGSAFG
LFALGRTIGWIAHALEQRESTRLIRPRAAYVGVRPAPISRV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaactacttcaccgccgcacaggccgccgagcgtcttggcgtgtccctccagacgctt
tatgcctacgtaagccgtggattgcttcacgccgagcccggtaaaacgcaccgcgagcgc
cgctatcgcgtcgccgatgtcgagcgtctggcggcgcaacgcacccgtggtcgcaagccc
agggaggtcgccaaggcggcgttggactgggggatgccggtgctcgagtcctcgatcacg
ctgatcgaggacggacgatgctactaccgggggcgtgatgccctgacgatggcggagtcg
acctcggtcgaagccacggcggcgtggttgtggcaatgcgacgaggcaacggcgttcgcc
gcgcgcgaggaccgcgaatccggcccggacgattggcccgccttgctgctcgatcgatat
cgcgggcaacgtgccgaatcggcgttgctgccggcatttacggtcgcgagcgacgatacc
gccacaggcatctggcagcgcgatgcgacgcgtgtcgcgcggggaagcgccgaactgctg
aggttgatgacggcctgcctgctgggcaccacgccgagcgacgcccccgttcacgagcaa
tgcgcgcacgcgtggggcgttcgcgatgcgtcgggggcggatctgattcgcatggcgctg
gtgctgtgtgccgatcacgagttgaacgcgtcgagctttacggcgcgttgcgtggcatcg
acgggcgccagcctgcgcgcggcggtcgtcgccggtctgtcggcgctgaccggggggcgt
cacggcggcaccaccgcgcgcaacgaggcgatgtgggatgaggtgggcgagacgcacgtt
gccgcgcgcctgcgagagcggctcgcgcgtggtgagaagctgcctggcttcgggcatcac
ctttatccagccggtgatgttcgcgcgagcgcgatgcttgcgcgggtgctgccgtcgcac
ccgacatggcagaccatgatcgaagcggccgacacgttggtcgggcagcgcccgtcgctc
gatttcgcgctggtggcggtgcggcgtcacctcgggctgccggtgggctcggcgttcggc
ctgttcgcgctgggccgcaccattggctggatcgcccatgcgctcgagcaacgagaaagc
acccgcttgattcgcccgcgcgcggcgtacgtgggcgtaagacccgcgccgatctcccgc
gtgtga
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