Pandoraea pnomenusa RB38: DA70_04820
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Entry
DA70_04820 CDS
T03067
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA70_04820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_04820
Transporters [BR:
ppno02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DA70_04820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AHN73859
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Position
2505033..2506784
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AA seq
583 aa
AA seq
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MWLVQRLPQAGPRIAWPQHLARWLPAVPALLFLAVFFIVPVVEILQGGLYDADGVLSVAQ
FARMTHSAVYIKVLASTFWIAFLTAALSVLLGYPVAYLLARLSARSRERWLLWIVLPFWT
SYLVKTYAWMLLLSKTGLLTVVATHLGLIDSAGTLAPSLTGVLIGMVHAMLPLAVMTMLP
IMRGINMQLVQAAQTLGADRATGFFTVFLPLSGAGAAAAGLLVFISSLGFFIVPALLGSP
RESMVAQLVISSVLELFDLRFAGALSTVLLLCSIVVFYVYDRVVGLSSLAGEAPERRAGA
GGRMLPALIAIGRLAGRFSFSRGRERADGGFGLKAYTWAVVLALVLPIAFIVPLAFTKQS
FVAFPPQLFTMKWFVAFLESSVWQAALLRSLGVGFATAALALVLGFGASLALVRLPSRWR
KPLFAVFIAPLIVPRIVVAVGLLYLFARWELAGTNAGLVIGHTVLAIPYVVVTLSASFKR
FDWRLDDAAKMLGASAFTRVRTVLLPLLAASLGSAFLFAFIVSFDDLTIAIFVSGGINTT
LPKQMWDDIQLAVTPTLAAVATSLVFLMVFIVWLSSIFKRKSY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgttcaacgcctgcctcaggcggggccccgtattgcctggccgcagcacctg
gcccggtggttgccggcggtgcccgcgttgctgtttcttgccgtgttcttcatcgtgccg
gtcgtcgagatcctgcaaggcgggctctacgatgccgacggcgtgctctcggtcgcgcag
ttcgcgcgcatgacgcactcggccgtctacatcaaggtgctggcctccacattctggatc
gcctttctgacggccgcgctttcagtattgctcggctatccggtggcctatctgctcgcg
cggctctcggcgcgttcgcgcgagcgctggttgctttggatcgtgctgccgttctggacg
agttatctcgtcaagacctacgcctggatgttgctgttgtccaagaccggattgctcacc
gtcgtggcaacccatctggggctgatcgacagtgcgggtacgctcgcaccgtccctcacc
ggcgtgctcatcggcatggtgcacgccatgctgccgctcgcggttatgacgatgctgccc
atcatgcgcggcatcaacatgcagctcgttcaggccgcacagacgctcggcgcagatcgc
gcgaccggcttcttcaccgtgttcctgccgctgtcgggtgccggcgcggcggcggccggg
ctgctcgtattcatctccagtctgggcttcttcatcgtgcctgcgctgctcggctcgccg
cgcgaatccatggtggcgcagctcgtcatctcctcggtgctggagctgttcgacctgcgc
ttcgccggtgcgctctcgaccgtgctgctgctgtgctccatcgtcgtgttctacgtgtac
gaccgcgtggtcgggctgtcgtcgctcgctggcgaagcgcccgagcgacgcgccggggca
ggggggcgcatgctgcccgcactcattgccatcgggcgtctcgcgggccgcttctcattc
tcgcgtggtcgtgaacgcgccgatggcggcttcgggctcaaggcctacacgtgggccgtg
gtgctcgcgctcgtcttgccgatcgcgttcatcgtgccgctggcgttcacgaagcagtcg
ttcgtggcatttccgccccagttgttcacgatgaagtggttcgtcgcattcctcgagtcg
agcgtgtggcaggcggcgttgctgcgctcgctcggcgtgggttttgcgaccgcggccctc
gcgctggtgctcggcttcggcgccagcctcgcgctggtacgtctgccgtcacgctggcgc
aagccgctgttcgccgtattcattgccccgctgatcgtgccgcgcatcgtggtggccgtc
ggcctgctgtatctgttcgcccgctgggagctggcgggcaccaacgcagggcttgtcatc
ggccacaccgtgttggccattccctacgtggtggtcacgctcagcgcgagcttcaagcgc
ttcgactggcgtctggacgatgccgccaagatgctcggcgcgtcggccttcacccgggtt
cgcaccgtgctcctgccgttgcttgccgcgagcctcgggtcggcgttcctgttcgccttc
atcgtgtcattcgacgacctgaccatcgccatcttcgtttccggcggcatcaacaccacg
ctgcccaagcagatgtgggacgacatccagctcgcggtcacgccgacgctggcggccgtg
gcgacatcgctggtcttcctgatggtgttcatcgtatggctgtcttccatcttcaaacgt
aaaagctattga
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