Pandoraea pnomenusa RB38: DA70_04950
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Entry
DA70_04950 CDS
T03067
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_04950
Transporters [BR:
ppno02000
]
Other transporters
Pores ion channels [TC:
1
]
DA70_04950
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AHN73881
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Position
complement(2475583..2477778)
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AA seq
731 aa
AA seq
DB search
MSRLTSSRLPCEPSSVTRAVTGVSPARAVGVIWAASLTLAAGNAMAQQAPATADVAQGTA
ALPATSVSAGRDDDVRVERVSSGALGTRRAVDTPFSVVAVNSEQIKNQMAQTATDAFKWD
PAVSTLSENKRNENAYFAVRGMRVDMLDGTKVDGQNFVSWQADIPLEPFEQVELLKGLSG
FMYGFGAPGGIVNYVLKRPTDEPLRQFSVGYEASNVWSQKLDLGGRFGPDNRFGYRLNLV
NEEGNTAEPNNHVRRKTISFATDFRITRDLTWSADVAYWKRQTTGTLFGLNFAGAGAVPD
ASKVARNLAQPFSYYETDALTAGTAVDYRINDRWKANFKYRFARQNRLNGDSFLSVLNAA
GDYADTQYKWKTAYYYQAWDGMLQGKIDTGPLKHDVVFGVSYQSQVKLNDNGLGGNGIAL
GTSNIYNPSLLPNQDIGLDYEPYRSEKISQRAIFASDTVGITSRISALVGLRYTQFNDDL
YDIAGQTSTSYRAKPVTPTLALMYKTDSDSTAYASYVESLEPGGSAGVTDNNYPQTFGPL
KSKQYEVGWKADKQRWGANLALFRVERGYAYTNQANDFVQDGTQRFQGLDASGWVRVARD
WRVLGGVLLLNTKAVGVDDPSVAGKRIFATPKYVVTGRVEYDTPFVRGLTLAAGVKVTGQ
QEVDAANTLSIPAYTTMDVSAKYATRIAGKSVVLRAAVNNLTDKHYWTTTYNGFVLPGST
RTFLASATMDF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ctgtctcgtttgacttcgtcgcgcctgccttgcgaaccgtcatcggtcacacgcgccgtg
accggcgtatcccccgcgcgggcggttggcgtcatttgggctgcatcgctcacgctggcc
gctggcaatgcgatggcgcagcaggcaccggccacggctgacgtggcgcaaggcaccgcc
gccctgcctgctaccagcgtgtcggccgggcgcgatgacgacgtgcgcgtcgagcgggtt
tcgagcggcgcgctaggcacgcgccgagcggtggacacgccgttctccgtggtcgcggtc
aacagcgagcagatcaagaaccagatggcgcagaccgccacggacgccttcaagtgggac
cccgcggtgagcaccctgtcggagaacaagcgaaacgagaatgcgtatttcgcggtgcgc
ggcatgcgcgtcgacatgctcgacgggaccaaggtcgacggtcagaattttgtgtcgtgg
caggccgacattccgctcgaaccgttcgagcaggtcgaactgctcaagggcctgtcggga
ttcatgtatggcttcggtgcgccgggcggcatcgtcaactatgtgctcaagcgcccgacg
gacgaaccgctgcgccagttctccgtcggctacgaagccagcaacgtctggagccagaag
ctcgatctgggcggacgcttcggcccggacaaccgtttcggctatcgcctgaatctcgtg
aacgaagaaggcaacacggccgaacccaacaaccacgtgcgccgcaagacgatctcgttc
gcgacggacttccgcattacccgcgatctcacctggtcggcggacgtggcgtactggaag
cgccagacgaccggcaccctgttcggcctgaacttcgcgggcgccggcgcggtgcccgat
gccagcaaggtcgcgcgcaatcttgcccagcccttctcgtattacgagaccgatgccctc
accgcgggcaccgcggtcgactaccgcatcaacgatcggtggaaggcgaacttcaagtac
cgctttgcccggcagaaccgcctgaacggcgacagcttcctttcggtgctcaatgccgcg
ggcgactatgcggatacgcagtacaagtggaagacggcctattactaccaggcctgggac
ggcatgctgcaaggcaagatcgacaccggcccgctcaagcacgacgtggttttcggggtc
tcgtaccaaagccaggtcaagctcaacgacaacggtctgggcggcaatggcatcgccctt
ggcacgagcaacatctacaatccgtcgctgctccccaaccaggacatcggactcgattac
gagccttaccgcagcgagaagatttcgcagcgcgcgatcttcgcgagcgacacggtgggc
atcacgtcgcgcatctccgcactggtcgggctgcgttatacgcagttcaatgacgatctg
tacgacattgccgggcagacgagcacctcttatcgcgcgaagccggtcacgcccacgctc
gcattgatgtacaagacggactcggattccacggcatatgcgagctacgtcgagtcgctc
gaaccgggcggctcggcaggcgtcaccgacaataactatccgcagacgtttggcccgctc
aagagcaagcagtacgaggtgggctggaaagcagacaagcagcgctggggcgcgaatctc
gcgctgttccgcgtggagcgcggctatgcttacacgaaccaggcgaacgacttcgtgcag
gacggcacgcaacgcttccaggggctcgatgcgagtggctgggtacgtgttgcgcgcgac
tggcgggttctgggcggcgtactgctgctcaacacgaaggccgtgggcgttgacgatccg
agcgtggcgggcaagcgcatcttcgccacgccgaagtatgtggtgaccggtcgcgtcgaa
tacgacacgccgttcgtgcgcggcctgaccctggccgcgggcgtgaaggtcaccggccag
caggaagtcgatgccgccaacacgctgtcgattccggcctacaccaccatggatgtgtcg
gcgaagtacgccacgcgcatcgccggcaagtcggtcgtgttgcgcgccgccgtcaacaac
ctgacggacaagcactactggacgacgacctacaacggctttgtgctgccgggttcgacc
cgcaccttcctcgccagcgccacgatggacttctga
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