KEGG   Pandoraea pnomenusa RB38: DA70_04965
Entry
DA70_04965        CDS       T03067                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ppno  Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:ppno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppno03032]
    DA70_04965
   03036 Chromosome and associated proteins [BR:ppno03036]
    DA70_04965
   03400 DNA repair and recombination proteins [BR:ppno03400]
    DA70_04965
DNA replication proteins [BR:ppno03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DA70_04965
Chromosome and associated proteins [BR:ppno03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DA70_04965
DNA repair and recombination proteins [BR:ppno03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DA70_04965
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AHN73884
UniProt: A0A378YB76
LinkDB
Position
complement(2472453..2472731)
AA seq 92 aa
MNKQELIDAVAGATGASKAQTGETIDTLIEVIKKAVAKGDTVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgccggcgctacgggtgccagcaaggctcaa
accggcgagaccatcgatacgctgatcgaggttatcaagaaagccgtcgccaagggtgat
acggttcagttgatcggcttcggctcgttcggttcgggcaagcgtgccgcgcgtaccggc
cgcaacccgaagaccggcgaagcgatcaagatcccggccgccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgctgtgaacaagaagtaa

DBGET integrated database retrieval system