Pandoraea pnomenusa RB38: DA70_05310
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Entry
DA70_05310 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppno03009
]
DA70_05310
Enzymes [BR:
ppno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
DA70_05310
Ribosome biogenesis [BR:
ppno03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DA70_05310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AHN73949
LinkDB
All DBs
Position
complement(2394376..2396262)
Genome browser
AA seq
628 aa
AA seq
DB search
MSDTPRAKLSAKHPRTLDKTRAPVRSSGALRRPTKAVPASMLDAGGTKKAAAKPARPRPA
DDASAPAGARRPAGNAAVPRKSAANAANAANTTNAVKPYEKRATGDRPPQRGQRERVAGG
RAVRGAEGTPRRFDEDRPRRAGEGSAGGARGDYARPVKRGADDRAPRRFDEDRPRRADEG
GARGGARGDYARPVKRGADDRAPRRFDEDRPRRADEGGARGGARGDYARPAKRGADDRAP
RRFDEDRPRRADEGGARGGARGDYARPVKRGADDRAPRRFDEDRPRRADEGSARGARGDY
ARPAKRGADDRAPRRFDEGGARGARGDYARPAKRSGEDAPRGRFAREDHNARPARPARAA
RVERDDDDDIKVHHDAAGSLRLSKRMSELGLCSRREADEWIAKGWVRVDGKVVTELGTKI
LPTQEITVVQAAHKEQANRVTILLHKPVGYVSGQAEDGYEPAVVLVTREHHWAEDDAGVR
FSPSHLRSLAPAGRLDIDSTGLLVLTQDGRIAKQLIGEDSEIEKEYLVRVSYNEHSQNVQ
AHFPADRLALLRHGLSLDDQPLKPAQVDWQNPEQLRFVLKEGKKRQIRRMCDLVGLHVTG
LKRVRMGRITLGNLPVGEWRYLRAGEGF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccccgcgcgccaaactgagcgccaaacacccccgcaccctcgacaagacg
cgcgcccccgtgcgttcgtcgggcgccttgcgtcgtccgaccaaggcggtgcccgcatcg
atgctcgacgctggcggcacgaagaaagccgctgcgaaaccggcgcgcccgcgcccggcg
gatgacgcgtcggcgccagcaggggcgcggcgccctgccggcaatgccgctgtcccgcgc
aaatccgcggccaacgcggccaacgcggccaatacgaccaatgcggtcaagccgtatgag
aagcgcgcaacaggcgatcgtccgccccaacgcggccagcgcgagcgcgtggccggcggc
cgcgcggtccgtggcgccgagggtaccccgaggcgcttcgacgaggaccgcccgcgtcgc
gccggcgaaggtagcgcgggtggcgcacggggcgattacgcccgcccggtcaaacgcggc
gccgatgaccgcgcgccgcgccgtttcgacgaagaccgtccgcgtcgcgccgacgaaggt
ggcgcgcgtggcggcgcacggggtgattacgcccgcccggtcaaacgcggcgccgatgac
cgcgcgccgcgccgtttcgacgaagaccgtccgcgtcgcgccgacgaaggtggcgcgcgt
ggcggcgcacggggtgattacgcccgcccggccaaacgcggcgccgatgaccgcgcgccg
cgccgtttcgacgaagaccgtccgcgtcgcgccgacgaaggtggcgcgcgtggcggcgca
cggggtgattacgcccgcccggtcaaacgcggcgccgatgaccgcgcgccgcgccgtttc
gacgaagaccgtccgcgtcgcgccgacgaaggtagcgcgcgtggcgcacggggtgattac
gcccgcccggccaaacgcggtgccgatgaccgcgcgccgcgccgtttcgacgaaggtggc
gcacggggtgcacggggtgattacgcccgtccggccaaacgtagcggtgaagacgcacca
cgagggcgcttcgcccgcgaggaccacaatgcgcgtccggcacgcccggcacgcgcggcg
cgtgtcgaacgcgacgacgatgacgacatcaaggtccatcacgacgcggcaggctcactg
cgcctgtccaagcgcatgtcagagctcggcctgtgctcgcgacgcgaggcggatgagtgg
attgccaaggggtgggtgcgcgtcgacggcaaggtcgtgacggaactcggcaccaagatt
ctgccgacgcaggaaatcacggttgtccaggccgcgcacaaggagcaggccaaccgcgtc
acgatcctgcttcacaagcccgtgggctatgtctccggacaagcggaagacgggtacgaa
cccgccgtcgttctggtcacgcgagaacaccattgggccgaagacgatgccggcgtgcgt
ttctcgccatcgcacctgcgtagcctggcgcccgccgggcgtctcgatatcgattcgacc
ggcctgctcgtcctgacgcaggacgggcgcatcgccaaacaactgatcggcgaagattcc
gagatcgagaaggagtatctcgtgcgcgtgtcctacaacgagcattcgcagaacgttcag
gcacacttcccggccgatcgcctggcgctgctgcgccatggactgtcgctcgacgaccag
ccgctcaagccggcccaggtcgactggcagaatccggagcaactgcgattcgtgctcaag
gaaggcaagaagcgtcagatccgccggatgtgcgacctcgtcggcctgcacgtcacggga
ctcaagcgcgttcgcatgggacgtatcacgctcggcaatctgcccgtcggcgagtggcgc
taccttcgcgccggcgagggattctga
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