Pandoraea pnomenusa RB38: DA70_05355
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Entry
DA70_05355 CDS
T03067
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00300
Lysine biosynthesis
ppno01100
Metabolic pathways
ppno01120
Microbial metabolism in diverse environments
ppno01230
Biosynthesis of amino acids
Module
ppno_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DA70_05355
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppno01002
]
DA70_05355
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DA70_05355
Peptidases and inhibitors [BR:
ppno01002
]
Metallo peptidases
Family M20
DA70_05355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AHN73958
UniProt:
A0A378YAE5
LinkDB
All DBs
Position
complement(2381075..2382226)
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AA seq
383 aa
AA seq
DB search
MTSSQGATLALTEQLIARHSVTPEDRDCQTILARRLEAIGFACETIASNGVTNLWALKRG
TRGTDGKLLVFAGHTDVVPTGPLDQWHSDPFAPTHRDGMLYGRGAADMKTSLAAFVVASE
EFVARHPAHEGSIGFLLTSDEEGPATDGTVKVVEALSARGERLDYCVVGEPTSSQRLGDM
VKNGRRGSMSGKLVIKGVQGHIAYPHLAKNPTHLFAPALAELTQTVWDNGNEYFPPTTWQ
ISNIHAGTGATNVIPGELTVMFNFRFSTASTSDGLQKRVHELLDRHGLTYTLDWSISGQP
FLTPRGDLSQALSSAIREETGLETELSTTGGTSDGRFIARICPQVIEFGPCNASIHKIDE
HIAVADIEPLKNIYRGVLARLVA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctcccagggcgccacgctggcgcttaccgagcaactgatcgcccgtcactcg
gtgacgcccgaagaccgcgactgccagacgatcctcgcgcgccgcctcgaggcgatcggc
ttcgcgtgcgagaccatcgcctcgaatggcgtgaccaacctctgggcgctcaagcggggc
acgcgcggcaccgatggcaagctgctcgtcttcgccggtcatacggatgtcgtcccgacc
gggccgctcgatcaatggcattccgacccgtttgcaccgacgcatcgcgacggcatgctc
tacggccggggcgccgccgacatgaagacctcgctcgccgcgttcgtggtcgcgtcggag
gaattcgtcgcccggcatcccgcgcacgagggctccatcggcttcctcctcacgagcgac
gaggaaggcccggccaccgacggcacggtaaaggtcgtcgaggcgctgagcgcgcgtggc
gagcgactggactactgtgtggtcggcgagccgacgtcgagccagcgcctgggcgacatg
gtcaagaacggtcggcgcggatcgatgtccggcaagctcgtgatcaagggcgtgcaaggc
cacatcgcctacccgcatctggcgaagaacccgacgcatctgtttgcaccggcgctcgcc
gaactcacgcaaacggtgtgggacaacggcaacgagtatttcccgcccaccacctggcag
atttcgaacattcatgccggcacgggcgcgaccaacgtcattcccggcgaactgacggtg
atgttcaatttccgcttctcgacggcgagcacctcggacggcctgcaaaagcgcgtccac
gaactgctcgaccgccacggcctgacgtacacgctcgactggtcgatcagcggccagccg
ttcctcacgccgcgtggcgacctctcgcaggcgctctcgagtgccattcgcgaggaaacg
ggcctggagaccgaattgtcgacgaccggcggcacttccgacggccgattcattgcgcgc
atctgcccgcaggtgatcgagttcgggccatgcaatgcgagcatccacaagatcgacgag
catattgcggtggccgacatcgaaccgctcaagaacatttatcgcggggtgttggcgcgt
ctggtggcctga
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