Pandoraea pnomenusa RB38: DA70_05400
Help
Entry
DA70_05400 CDS
T03067
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DA70_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_05400
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DA70_05400
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DA70_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHN73967
LinkDB
All DBs
Position
2369150..2370166
Genome browser
AA seq
338 aa
AA seq
DB search
MSHDAAARAAAQAEARSTMAGDTDVATLAEPVAARDDAAADDMPPWDLATSQAPEAARRA
VRPERDPAVAGRPVAPVRDEPAPTSRSTGRRTADAPPDDIPMWLDSEGNGDGDAAADAAL
WSIMRDAGEGATPARAALPGVETLDWDALAGRVADCRLCGLCEKRTQTVFGVGDREADWL
LIGEAPGQQEDLQGEPFVGQAGKLLDNMLRAVTLQRGENVYIANVLKCRPPNNRDPEPNE
VASCEPYLKRQVALLRPRVIVVMGRFAAQSILRTQASIASLRGRVHEYEGVPVIVTYHPA
YLLRSLPDKAKAWTDWCLARATYEAVCESTPANTPTAN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgacgccgcggcccgggccgctgcgcaagccgaagcccgctcgacgatggcc
ggcgacactgatgtggcgacgctcgccgagccggtggcggcacgagacgatgctgcggcg
gacgatatgccgccctgggacttggcgacgtcgcaagcccccgaggcggcgcgccgggcg
gtccgacccgagcgcgatcctgcggtagccggcagacctgtggcgcctgtgcgggacgaa
ccggcgccgacctcgcgcagcaccggccggcgcaccgcagacgcgccgccggacgacatc
cccatgtggctcgacagcgaaggtaacggggacggcgatgccgccgccgatgccgcactc
tggtcgatcatgcgcgatgcgggcgagggtgcgacgccggcgcgtgcggccctgccgggc
gtggaaacgctcgactgggacgcgctcgccggacgcgtggcggattgccgcctttgcggg
ttgtgcgagaagcgtacgcaaacggtcttcggtgtgggcgatcgcgaggccgactggctg
ctcatcggcgaggcgccggggcagcaggaggatctgcagggcgagccctttgtcggtcag
gcgggcaagctgctcgacaacatgctgcgcgcagtgacgttgcagcgtggcgagaacgtc
tacatcgccaacgtgctcaagtgccgcccacccaacaatcgcgatcccgaacccaacgaa
gtcgcgagctgcgagccttacctgaagcgtcaggtcgcgctgcttaggccccgggtgatt
gttgtcatgggtcgcttcgcggcgcagagtattctgcgtacccaggcgagcatcgccagc
ttgcgcggacgtgtgcacgagtacgaaggggtgccggtgatcgtgacgtaccatccggcc
tatctgttacgcagcctgcccgacaaggccaaggcctggacggattggtgtctggcgcgg
gcgacctacgaggcggtgtgcgaatcgactccggccaacacgcctacggcgaactga
DBGET
integrated database retrieval system
