Pandoraea pnomenusa RB38: DA70_05445
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Entry
DA70_05445 CDS
T03067
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00630
Glyoxylate and dicarboxylate metabolism
ppno00640
Propanoate metabolism
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01120
Microbial metabolism in diverse environments
ppno01200
Carbon metabolism
Module
ppno_M00012
Glyoxylate cycle
ppno_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DA70_05445
00640 Propanoate metabolism
DA70_05445
Enzymes [BR:
ppno01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
DA70_05445
4.1.3.30 methylisocitrate lyase
DA70_05445
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Gene cluster
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Motif
Pfam:
ICL
PEP_mutase
CUPID
Motif
Other DBs
NCBI-ProteinID:
AHN73976
UniProt:
A0A378YBR5
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All DBs
Position
2358407..2359729
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AA seq
440 aa
AA seq
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MTTRQEQVKQLEQDWANNPRWKGIKRGYSAEDVVRLRGSIQPEQTLARRGAERLWSMIND
EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPQVVR
RINNTFTRADQIQWSEGKNPGDEGYIDYFAPIVADAEAGFGGVLNAFELMKAMIEAGAGG
VHFEDQLASVKKCGHMGGKVLVPTREAVAKLVAARLAADVLGVPTVLIARTDAEAADLIT
ADVDPLDQPFCTGERTVEGFYRTRNGLDQAIARGLAYAPYADLVWCETGKPDLEFAKQFA
EGIHKHFPGKMLSYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHSLNYSM
FNLAHGYARRQMSAFVELQEAEFAAADKGFTAVKHQREVGTGYFDAVTQTIERDASTTAL
KGSTEDEQFFDEKKAQVKAA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgtcaagagcaagtgaagcaactcgagcaggactgggcgaacaacccgcgc
tggaagggcatcaagcgtggctactcggccgaggacgtggtgcgtctgcgcgggtcgatc
cagccggaacaaacgcttgcccgccgcggtgcggagcgcctgtggagcatgatcaacgac
gagccgttcgtgaacgccctgggcgctctgaccggcaaccaggccatgcagcaggtcaag
gccggcctgaaggccatctatctgtcaggctggcaggtggcgggcgacgccaacctcgcg
ggcgagatgtaccccgaccagtcgctgtacccggccaactcggtgccgcaggtcgtgcgc
cgcatcaacaacaccttcacgcgcgctgaccagattcagtggtcggaaggcaagaacccg
ggcgacgagggctacatcgattacttcgcgccgatcgtggccgatgccgaagccggcttc
ggcggcgtgctcaacgccttcgaactgatgaaggcaatgatcgaggcgggcgccggtggc
gtgcacttcgaagaccagctcgcttcggtgaagaagtgcggccacatgggcggcaaggta
ctggtgccgacgcgcgaggccgtggccaagctggtcgccgcgcgcctggccgccgacgtg
ctcggcgtgccgacggtgctgatcgcccgtaccgatgctgaagccgccgacctgatcacc
gcggacgtcgatccgctcgaccagccgttctgcaccggcgagcgcacggtcgaaggcttc
taccgcacccgcaacggtctcgaccaggccatcgcccgcggtctggcctatgcgccgtac
gccgatctggtgtggtgcgaaaccggcaagccggatctcgaattcgccaagcagttcgcc
gagggcattcacaagcacttcccgggcaagatgctttcgtacaactgctcgccgtcgttc
aactggaagaagaacctcgacgacgccaccatcgccaagttccagaaggaactcggcgcc
atgggctacaagttccagttcatcacgctggccggcttccacagcctgaactactcgatg
ttcaacctggcacacggctacgcccgtcgtcagatgagcgccttcgtggagttgcaggaa
gccgaattcgctgctgccgacaagggcttcacggcagtcaagcaccagcgcgaggtgggt
acgggctacttcgatgccgtcacgcaaacgatcgagcgcgacgcatcgaccacggccctg
aagggttcgacggaggacgaacagttcttcgacgagaagaaggcgcaggtcaaggcagcc
tga
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