Pandoraea pnomenusa RB38: DA70_05725
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Entry
DA70_05725 CDS
T03067
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppno03016
]
DA70_05725 (truB)
Enzymes [BR:
ppno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DA70_05725 (truB)
Transfer RNA biogenesis [BR:
ppno03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DA70_05725 (truB)
Prokaryotic type
DA70_05725 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHN74028
LinkDB
All DBs
Position
2299020..2300012
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AA seq
330 aa
AA seq
DB search
MTDPRSQAPRQKLPRFALDGVLLLDKPLGLSSNDALIKAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEAHVRLGETTTTGDAEGEVLQTRPVTVDDAAIRAILP
RFMGRISQVPPMYSALKRDGKPLYEYARAGQTLEREAREVTVHALALTQSALPHTNEFTF
RVTCSKGTYVRTLAEDIGEALGCGAHLRGLRRTAVGPLTLDGAVTLEDLSALDHAQRVAK
LAPVDALLKTLPAIMLDETLARRFSHGQRLRLDEIRCPTPLRAYAAAHGEIEVKVYTEAT
SEAASRLLGVARLDGEALLTPQRLLKTQSS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcaccccgccaaaagctcccccgtttcgcactcgatggc
gtgttgttgctggacaagccgctcggcctgtcatccaacgatgccctgatcaaggccaag
cgtttgcttcaggcgctcaaggcaggccacacgggcacgctcgatcccttggcgaccggg
ttgctgccgctgtgtttcggcgaggcgacgaagttctcgcaggacttgctcgaggccgac
aagacctacgaagcgcacgtgcgcctgggggagacgaccacgacgggcgacgccgaaggc
gaggtgttgcaaacgcggccggtgacggtggacgatgcggcgatccgtgccatattgcct
cgtttcatggggaggatttcgcaagtcccgccgatgtactcggcgctcaagcgcgacggc
aaaccgttgtacgaatatgcgcgcgcgggccaaacgctcgaacgtgaggcgcgcgaggtc
accgtccatgcactggcgctgacgcaaagcgcactgccgcacacgaacgaattcacgttc
cgtgtgacgtgcagtaaaggcacatacgtgcgcacgcttgcggaagacatcggggaagcg
ttggggtgcggtgctcacctgcgcggtttgcgccgcacggcggtgggaccgctgacactc
gacggcgccgtcacgctcgaagacctgagcgcgctggatcatgcgcaacgcgtggcgaag
ctcgcaccggtcgatgcattgctcaagacgctgcccgcgatcatgctcgacgaaacgctg
gcgcgacgcttcagtcacggccagcgtctgcgactcgacgagatccgctgtccgacgcca
ttgcgtgcttacgcagccgcgcacggcgagatcgaagtcaaggtctacacggaggccacg
agcgaagccgcttcgcgcttgctgggtgtggcgcggctcgatggcgaagcgttgctcaca
ccgcagcgactgctcaagacacagtcatcgtga
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