Pandoraea pnomenusa RB38: DA70_05950
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Entry
DA70_05950 CDS
T03067
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DA70_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_05950
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DA70_05950
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DA70_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Ig_2_Mok13
Motif
Other DBs
NCBI-ProteinID:
AHN74066
UniProt:
A0A378YA41
LinkDB
All DBs
Position
complement(2245017..2245796)
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AA seq
259 aa
AA seq
DB search
MQLATWNVNSLKVRLGHVQDWLRSNPVDVLCLQELKLTDENFPITELAALGYTSHFTGQK
TYNGVALLVNHAKVGEAQDLVKNLPNFADEQQRLITATVGGVRVVCGYFPNGQAVGSDKF
AYKLNWLDALTHWLSDEMERHPQLAVLGDYNIAPEDRDVHDPAKWEGQNLVSPQERQAFA
RLQGLGLRDTFRMFDQPEKTFSWWDYRMGAFRRNAGLRIDHILVSSTLAERCTACEIDRV
PRTWEQPSDHAPVVATFKD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagccacctggaacgtcaattcgctcaaggtccgtctcggtcatgtgcaggat
tggctgcgcagcaatccggtcgacgtgctgtgcctgcaggaactgaagctcaccgacgag
aacttcccgatcaccgagcttgcagcgcttggctatacctctcacttcacggggcaaaag
acgtacaacggcgtcgcgctgctggtcaatcacgccaaggtcggcgaagcgcaggatctc
gtgaagaacttgccgaatttcgccgacgagcaacagcggctgatcacggcgaccgtcggc
ggcgtgcgcgtcgtctgcggttatttccccaacggtcaggccgtgggctccgacaagttc
gcctacaagctcaactggctggacgcccttacccattggctctccgacgaaatggagcgg
cacccgcaactcgccgtgctgggcgactacaacatcgcccccgaagaccgcgacgtgcat
gaccccgcgaaatgggagggccagaacctggtgtcgcctcaggagcgtcaggcgttcgcc
cggctgcaaggcctcggactgcgcgacacgttccgcatgttcgaccagccggagaagacc
ttcagttggtgggactaccgaatgggcgcgttccgccgcaatgccggactgcggatcgat
cacattctcgtgtcgtcgacgctcgccgagcggtgcacggcgtgcgaaatcgatcgtgtg
ccccggacctgggaacagccgtcggatcacgcgccggtcgtcgccacgttcaaggactga
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