KEGG   Pandoraea pnomenusa RB38: DA70_05950
Entry
DA70_05950        CDS       T03067                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ppno  Pandoraea pnomenusa RB38
Pathway
ppno03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DA70_05950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppno03400]
    DA70_05950
Enzymes [BR:ppno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     DA70_05950
DNA repair and recombination proteins [BR:ppno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     DA70_05950
SSDB
Motif
Pfam: Exo_endo_phos Ig_2_Mok13
Other DBs
NCBI-ProteinID: AHN74066
UniProt: A0A378YA41
LinkDB
Position
complement(2245017..2245796)
AA seq 259 aa
MQLATWNVNSLKVRLGHVQDWLRSNPVDVLCLQELKLTDENFPITELAALGYTSHFTGQK
TYNGVALLVNHAKVGEAQDLVKNLPNFADEQQRLITATVGGVRVVCGYFPNGQAVGSDKF
AYKLNWLDALTHWLSDEMERHPQLAVLGDYNIAPEDRDVHDPAKWEGQNLVSPQERQAFA
RLQGLGLRDTFRMFDQPEKTFSWWDYRMGAFRRNAGLRIDHILVSSTLAERCTACEIDRV
PRTWEQPSDHAPVVATFKD
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcaattagccacctggaacgtcaattcgctcaaggtccgtctcggtcatgtgcaggat
tggctgcgcagcaatccggtcgacgtgctgtgcctgcaggaactgaagctcaccgacgag
aacttcccgatcaccgagcttgcagcgcttggctatacctctcacttcacggggcaaaag
acgtacaacggcgtcgcgctgctggtcaatcacgccaaggtcggcgaagcgcaggatctc
gtgaagaacttgccgaatttcgccgacgagcaacagcggctgatcacggcgaccgtcggc
ggcgtgcgcgtcgtctgcggttatttccccaacggtcaggccgtgggctccgacaagttc
gcctacaagctcaactggctggacgcccttacccattggctctccgacgaaatggagcgg
cacccgcaactcgccgtgctgggcgactacaacatcgcccccgaagaccgcgacgtgcat
gaccccgcgaaatgggagggccagaacctggtgtcgcctcaggagcgtcaggcgttcgcc
cggctgcaaggcctcggactgcgcgacacgttccgcatgttcgaccagccggagaagacc
ttcagttggtgggactaccgaatgggcgcgttccgccgcaatgccggactgcggatcgat
cacattctcgtgtcgtcgacgctcgccgagcggtgcacggcgtgcgaaatcgatcgtgtg
ccccggacctgggaacagccgtcggatcacgcgccggtcgtcgccacgttcaaggactga

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