KEGG   Pandoraea pnomenusa RB38: DA70_06415
Entry
DA70_06415        CDS       T03067                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
ppno  Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:ppno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppno03021]
    DA70_06415
Transcription machinery [BR:ppno03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DA70_06415
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 HTH_Crp_2 HTH_20 KORA
Other DBs
NCBI-ProteinID: AHN74141
UniProt: A0A856LG05
LinkDB
Position
2147266..2148351
AA seq 361 aa
MLKRKRRTSQEEDLAAPEPDQEIDDRQSRQDEDVDDAFDEREAEDDDASSSDAAEDGGGV
RKRKSADADDFGTVLQAELTADTVQHYLNRISVKPLLTPAEELDYSTRAQAGEFDARQVM
IERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPGRGFRFSTYATWWIRQSI
ERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKSAAYVDAGEQREASIEDIADLTGKTPE
EITDILALNEHVASLDAPLDIDPGSSLLDLLSDDHSEAPEQEVQHRELEDLMRLWLSRLS
TKHRYVIERRFGLNRVEPATLEELADEMGLTRERVRQIQQEALVKLKRYFASNGVRKDAV
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgctcaagagaaagcgtcgtacttcgcaagaggaagacctcgctgccccggagcccgat
caggaaatcgacgatcggcaatcccggcaggacgaggacgtggacgacgctttcgacgag
cgcgaggcggaggacgacgacgcctcgtcgtccgatgccgccgaagacggcggtggcgtg
cgcaagcgcaagtccgccgacgccgacgacttcggcaccgtgctgcaggccgaactcacg
gccgacaccgtccagcactatctcaaccgcatcagtgtcaagccgctgctcacgcccgcg
gaggagctcgattactccacgcgcgcgcaagcgggcgagttcgacgcccgtcaggtcatg
atcgagcgcaacctgcgtctggtcgtgagtatcgccaaaggctatctcaatcgcggggtg
ccgctgctcgatctgatcgaggaaggcaatctcggcctgatgcacgccatcgagaagttc
gatccgggtcgcgggttccgcttctcgacctacgccacgtggtggattcgccagagcatc
gagcgggccatcatgaatcaggcgcgcaccgtgcgcctgccggtgcacgtcattcgcgag
ctcaatcaggtgctgcgcgccaagcgtcatctcgagaagagcgcggcgtatgtcgacgct
ggcgaacaacgcgaggccagtatcgaggacattgccgacctgaccggcaagacgcccgag
gaaattaccgacatcctcgcgctcaacgaacacgtggcgtcgctcgacgcaccgctggac
atcgatccgggcagcagtctgctcgatttgctgtccgacgatcacagcgaggctcccgag
caagaggtgcaacaccgagagctggaggacctgatgcgtctgtggctgtcccggctgtcg
accaagcatcgttacgtgatcgagcgtcgtttcgggctcaatcgcgtcgagcccgcgacg
ctcgaagagctggccgacgaaatggggctgacgcgcgagcgcgtacgtcagatccagcag
gaagcactcgtcaagctcaagcgctacttcgcgtcgaacggcgtgcgcaaggacgcggtg
ctctga

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