Pandoraea pnomenusa RB38: DA70_06825
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Entry
DA70_06825 CDS
T03067
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DA70_06825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppno03000
]
DA70_06825
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_06825
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DA70_06825
Transcription factors [BR:
ppno03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DA70_06825
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DA70_06825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AHN74213
UniProt:
A0A378YZ92
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All DBs
Position
complement(2055162..2056649)
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AA seq
495 aa
AA seq
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MTLDPEVCYKAVSARDRRFDGWFFVGVASTGIYCRPVCNVRTPRFENCSFYGSAAAAEKA
GFRPCLKCRPELAPGSARFDATRELADAAAAMIDEGFLNHADLPALAARIGITERHLRRI
FADEFGVSPVEYAQTQRLLLAKRLLTDTALPVTEVAMAAGFGSVRRFNGLFKTRYGFPPG
RLRQNARHAALPDGDLVFQLAYRPPLAWHALLDFLGERAIEGVEVREADTYTRTLDIERQ
DGRIVAGWCRVTPLPDRHALQVTLPPALAGSVPQVLGKLRHLFDLGARPDVIDSHLGKLA
AATPGLRVPGAVDGFEIAMRAIVGQQITVKGARRLLGRLAQRFGTPLPSPVHGLTHTFPS
ATQMLAAPADAIGEAGIIRSRIAAIHGVSRAIVEGRLRLDPLAPLETTVAALLAIKGIGP
WTAQYIAMRALGSPDAMPVDDLVLRQALGVADGRGVAARAARWAPWRAYAALHVWRAAAQ
GPAGQPVGILLEESA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgaccccgaggtctgctacaaggccgtctccgcccgcgaccggcgcttcgac
ggctggttcttcgtcggtgtcgcgtcgaccggtatctattgccgcccggtgtgcaatgtg
cgcacgccccgcttcgagaactgctcgttctacggcagcgccgccgctgcggaaaaggcc
gggttccgcccctgtctcaagtgccggccggaactcgcccccggcagtgcccgcttcgat
gccacgcgcgagctcgccgacgccgcggcggcaatgatcgacgaaggttttctgaatcac
gcggacctgccggcgctcgcggcacgcatcggcatcacggagcgacatctgcgccggatc
tttgcagacgaattcggcgtatcgccggtcgagtacgcgcaaacccagcgcctgctgctc
gccaagcgactgctcaccgacacggcactccccgtgacggaggtcgcgatggccgcaggc
ttcggcagcgtgcgacgcttcaatggcctgttcaagacgcgatacggcttcccgccagga
cgccttcgccagaacgcccgacatgccgccctgcccgacggggatctcgtcttccagctc
gcctatcgcccgccgctcgcgtggcatgccctgctcgatttcctcggcgagcgcgccatc
gaaggtgtggaggtgcgcgaggcggacacatacacgcgaaccctcgacatcgaacgtcag
gacggccggatcgttgcgggctggtgccgcgtgaccccgctgccggatcgccacgccctg
caggtgaccctgccaccggccctggcggggagcgtgccgcaggtgctgggcaagctgcgt
cacctgttcgatctgggcgcacgcccggatgtgatcgattcgcacctgggcaagctggcc
gccgccaccccgggacttcgcgtgcccggcgccgtcgacgggttcgagatcgcaatgcgg
gcgatcgtcgggcagcagatcacggtcaagggcgcgcgccgtctgcttggccgtctggcg
cagcgcttcggcacgccgctgccctcacccgtgcatggcctgacccatacgttcccgagc
gcgacgcagatgcttgcggctcccgcggacgcgattggcgaagccggtatcattcgaagt
cgaattgccgcgattcacggcgtctcgagggcgatcgtggagggccgcctgcgactggac
ccgctcgcaccgctcgagacgaccgtcgccgcgttgctggcgatcaagggcatcggccca
tggacggcgcagtacattgcgatgcgtgccctcggttcgccggacgcgatgccggtggat
gatctggtgctgcgccaggcgctgggcgtggcggacggtcgtggcgtggccgcacgcgcg
gcccgctgggcgccctggcgtgcatacgcggcgctacatgtctggcgcgcggcggcacag
ggaccggcagggcaacctgtcgggattttgctggaggaaagtgcatga
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