Pandoraea pnomenusa RB38: DA70_07550
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Entry
DA70_07550 CDS
T03067
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_07550
Enzymes [BR:
ppno01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DA70_07550
DNA repair and recombination proteins [BR:
ppno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DA70_07550
Prokaryotic type
DA70_07550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHN74338
LinkDB
All DBs
Position
1906029..1907528
Genome browser
AA seq
499 aa
AA seq
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MSEFHKGLVWLRRDLRCADNASLAQALASCAEVYVAFVFDTTILDGLPRDDRRVAFLHDS
VCELDETLRARGGGLVVRHGDPAHEIPALAKTLGVQAVFAARDYEPAALRRDRAVARSLG
DQGIAFELVKDHVIFEMNEVLSAQGEPYSVFTPYQRAWLRQVRPVDLAPHGKPSDFQRLA
PPPRAGNGAIPSLATLGFDVPESRRIAVPAGESGAQQLLDDFLPRMAHYHERRDYPAVRG
PSYLSVHLRFGTVSIRTLAREAHAAMQHGGEAGRGAQTWLGELIWRDFYFMILHHHPHVD
GRAFKPAYDAIEWATGKAADAAFLAWCEGRTGYPLVDAAMRQINQTGYMHNRLRMVTASF
LVKDLGIDWRRGEAYFAQALNDFDLAANNGGWQWAASTGCDAQPYFRIFNPVTQSEKFDP
EGRFIRKYVPELADLPNKALHAPWRADAQTLSDAGVVLGRNYPEPLVAHDVARQETLTRY
AVVKSPATSAEASGAPGAG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattccacaaaggtctggtatggctgcggcgcgatcttcgctgcgcggacaac
gcgtcgctggcgcaggcgctcgcgagttgcgccgaggtctatgtcgcgttcgttttcgac
acgaccattctcgacggactgccgcgcgacgatcggcgtgtcgctttccttcacgacagt
gtttgcgaactcgacgaaacgctcagggcgcgcggtggcgggctggtcgtgcgccatggc
gacccggcgcatgagattccggcactggcgaagacgctcggcgtgcaggcggtgttcgcc
gcccgggactacgagccggctgcgctcaggcgcgaccgtgccgtcgcccggtcgctgggc
gatcagggtatcgctttcgaactcgtgaaggaccacgtgatcttcgagatgaacgaggtt
ctgagcgctcagggcgagccctacagcgtattcacgccgtaccagcgtgcctggctcagg
caggtgaggccggtcgaccttgcaccgcacggcaagccgtccgatttccagcggttggcc
ccaccgccgcgcgccgggaacggggcgataccgtcgttggcgacgctgggcttcgatgtg
cccgagtcgcgccgcatcgcggtgcccgcgggggagtcgggcgcgcagcagctgctcgac
gacttcctgccacgcatggcgcactaccacgaacgacgcgactatccggccgtgcgtgga
ccgagctatctgtccgtgcacctgcgcttcggcaccgtgtcgatccgcacgctcgcgcgt
gaggcgcacgctgccatgcagcacggcggggaggccggccgcggcgcgcagacatggctc
ggcgagctgatctggcgcgacttctatttcatgatcctgcatcatcacccgcacgtggac
ggccgggcgttcaagccggcgtacgacgcgatcgagtgggcgacgggcaaggcggcggac
gctgcgttcctggcctggtgcgaggggcgcaccgggtatccgctcgtcgacgcggcgatg
cgtcagatcaatcagaccggttatatgcacaaccgcctgcgaatggtgacggcaagcttt
ctggtcaaggatctgggcatcgactggcggcgcggggaggcgtacttcgcgcaggccctc
aacgatttcgatctggcggcgaacaatggcgggtggcagtgggccgcctcgaccggttgc
gatgcccagccgtacttccgcatcttcaacccggtcacgcagtcggagaagttcgacccc
gaagggcgattcatccgaaagtacgtgcccgaactggctgatctgcccaacaaggcgctg
catgcgccctggcgcgccgatgcgcagaccttgagcgacgccggcgtggtgttggggcga
aactatccggagccgctggtcgcgcacgacgtggcgcgtcaggagacgctgacgcggtat
gcagtcgtgaaatcgccggcgacatcggccgaggcgagtggcgcgcctggtgccgggtga
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