Pandoraea pnomenusa RB38: DA70_08425
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Entry
DA70_08425 CDS
T03067
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppno03000
]
DA70_08425
Transcription factors [BR:
ppno03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DA70_08425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHN74490
LinkDB
All DBs
Position
complement(1725644..1726624)
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AA seq
326 aa
AA seq
DB search
MKHATLRQLKVFEAVARHLSFSRAAEELHLTQPAVSTQVKQLETHAGLPLFEQLGKKIFL
TPAGSEMLHYSRAIIALFRETEEAMDHLKGITGGKLNVAVISAGDYFFPRLLAAFTARHP
GVTLNLTVHNREELLHQLTENLTDLAVMVRPPHEIDTINEAFAPHPYVIVAPPGHALADQ
RQIPFSRLTQEPFISRERGSDTWNSLQDAFGERTQQLKITMEIASTETIKQAVVAGMGIS
FLSAHTVGMELRTGQLTVLDVKGFPAWQSWYVVHRRSKRLPPVALAFRQFLLDEGAMLID
GMMAYKSPVPPPAVSADGEHGDRLHR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgccacgctccgccaactgaaagtcttcgaagccgtggcgcgccatctgagc
ttttcgcgcgccgccgaagaactgcacctcacccaaccggctgtctccacgcaggtcaag
caactcgagacacacgccggtctgccgcttttcgagcaactgggcaagaagatctttctc
accccggcgggcagcgaaatgcttcactacagccgcgcgatcattgcgctctttcgcgag
accgaagaggcgatggatcacctcaagggcattacgggcggcaagctgaacgtggccgtg
atcagcgcgggggactacttctttccccgtctgctcgccgcgttcaccgcgcgccatccc
ggcgtgacgctcaacctcaccgtgcacaaccgtgaggaactgctgcatcaactcaccgaa
aacctcaccgacctggcggtgatggtgcgcccgcctcacgaaatcgatacgatcaacgag
gctttcgcaccgcacccctatgtcatcgtggcgccgcccggccacgcgctggccgatcaa
cgccagattccgttctctcgtctcacgcaagaaccgttcatcagccgcgagcgtggctcc
gacacctggaactccctgcaggatgcgttcggcgagcgcacccagcaattgaagatcacg
atggaaatcgccagcacggagaccatcaagcaggcggtcgtggcgggcatgggcatcagc
tttctgtcggcccacaccgtcggcatggaattgcggaccggccaactgacggtgctcgac
gtgaagggctttcccgcatggcagagctggtacgtcgtgcaccgtcgcagcaaacggctg
ccgcccgtggcgctcgcgtttcgtcagttcctcctcgacgagggcgccatgctcatcgac
ggcatgatggcctacaagagcccggtgccgccgcccgccgtgagcgccgacggcgaacat
ggcgatcgcttgcatcgctga
DBGET
integrated database retrieval system
