Pandoraea pnomenusa RB38: DA70_09180
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Entry
DA70_09180 CDS
T03067
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppno03000
]
DA70_09180
Transcription factors [BR:
ppno03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DA70_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_Crp_2
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AHN74622
UniProt:
A0A378YY71
LinkDB
All DBs
Position
complement(1548196..1549662)
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AA seq
488 aa
AA seq
DB search
MQILLSDLILQHLEPNAEIPRNRQLYNIVRASILDGRLPGGTRLPASRDLARELAISRNT
VLYAYEQLRAEGYVRSRTGDGTFVTDAIPEESMATRPGRTPDAPPDAEVNLSQRGRGLIL
NARASRRQAGAFMPGVPDLDAFPLKQWTRLVERHWRRRTPENLTYGYGGGHPALKKALAQ
HLRSARSVACEPEQIIITEGIHQAIHLCVQMLTDVRHRAWVEDPGYWGIHKVLQAYGVET
ISIPVDAEGLSPSPADWRKPPRLIFVTPSHQYPLGHVMSLARRRQLLQYARKHDAWIVED
DYDSEFRYAGRPIASLQGLEPGARVLYAGTFSKTLFPGLRIGYLVVPKAMVEPLQLGIAE
LYREGRWMDQAVLADFIGEGYYSAHIRRMRLIYGRRRALLQDAIRRHMGDARLISADSNA
GLHLTVRLAPEVDDVSLSARAQELGLIALPLSRYYLEQPPLRGLVLGYGCVPDDDIEPSL
ARLASLLA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagattctgctgtccgatctgatccttcagcatctcgaaccaaacgcggagattccg
cgcaaccggcagctgtacaacatcgtgagagcgtcgattctcgacggacgtctgccgggc
ggcacccgactgcccgcctcgcgcgatcttgcacgcgagttggccatctcccgaaacacg
gtgctgtacgcgtacgagcagttgcgcgccgagggctacgtacgctcacgcaccggcgac
ggcacgttcgtgaccgacgcgattccggaggagtccatggcaacccggccaggtcgcacg
cccgacgcgccgccggatgcggaggtcaacctctcgcaacgtggccggggccttatcctc
aacgcgcgagcgtcgcggcgtcaggccggtgccttcatgcccggtgtgcccgacctcgac
gcctttccactcaagcaatggacacgtctggtcgagcggcactggcgtcgccgcacgccg
gagaatctgacctacgggtatggcggcggtcaccccgcgctcaagaaagcgcttgcccag
catttgcgctcggcccgctcggtggcctgcgaacccgagcagatcatcatcaccgagggc
attcatcaggcgattcatctgtgcgtgcaaatgctcacggacgttcgccaccgcgcctgg
gtggaagaccccggctactggggcattcacaaggtgctccaggcgtatggcgtggagacg
atctcgatcccggtcgacgcggaagggctcagtccttcgcccgccgactggcgcaagccg
ccgcgcctgatcttcgtcacgccctcgcaccagtatccgttgggccatgtgatgtcgctc
gcgcggcgccgacagctattgcagtacgcccgcaagcacgacgcgtggatcgtcgaagac
gactacgacagcgaatttcgctacgccgggcgcccgatcgcgtcgttgcagggcctggag
ccgggggctcgcgtgctctatgccggcacgttcagcaaaaccttgttcccggggttgcgc
atcggctatctggtcgtgcccaaggcgatggtcgagcccctgcagctgggcatcgcggaa
ctctaccgcgagggtcgatggatggatcaggcggtgctggccgacttcatcggcgaaggg
tattattccgcgcacattcgccgcatgcggctcatctacggtcggcggcgggcattgctt
caggacgccatccgccggcacatgggagatgcgcggctcatatccgccgacagcaatgcg
ggcttgcacctgacggtcaggctcgcgcccgaggtcgacgacgtctcgctgtccgcacgt
gctcaggaactcggcctgatcgcattgccgctgtcccgctattatctggagcagccgccg
ctgcgcggactcgtgctcggctacggatgcgtgcctgacgacgacatcgagccgtctctg
gccagactcgcatcgctgctggcgtga
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