Pandoraea pnomenusa RB38: DA70_09890
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Entry
DA70_09890 CDS
T03067
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA70_09890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_09890
Transporters [BR:
ppno02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DA70_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA
AAA_16
SMC_N
AAA_29
AAA_22
AAA_30
nSTAND3
RsgA_GTPase
Zeta_toxin
AAA_25
nSTAND1
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHN74732
UniProt:
A0A378YVT1
LinkDB
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Position
1411363..1412475
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AA seq
370 aa
AA seq
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MTIANLQVSGLSKRYGDFVALAPTDLDVAQGEFLTLLGPSGSGKTTLLSLIAGLSQPDAG
AIRINGTDVTYGAPYERDIGMVFQNYALFPHMTVAENIAFPLQMRRTDAQAARKRVMDAL
EMVHLPHVAERYPRELSGGQQQRIALARCMVYRPSIILMDEPLGALDKKLRDHMQLEIKR
IHRELGTTIVYVTHDQEEAMTMSDRICLMNAGEIAQLGTPDDLYFRPKSVFVADFLGESN
LLDATVLERAGDQVRVAMPGVQGSLGAGAMVYDPQVERGRPVKLMLRPQNLHIHDGQPAA
DGMATISARLTDIMVTGGMTKLYLQSALTDGDAGKSLVAAFPTHRQGNRFEIGQTLGLAW
RADDAVAIAG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgccaatctccaggtgtcgggcctgtccaagcgctacggcgatttcgtcgcg
ctcgcaccgaccgacctcgatgtcgcccagggcgaattcctgaccttgctcgggcccagc
ggctcgggcaagaccaccttgctctcgctcatcgcgggtctgtcgcagcccgacgccggg
gccatccgcatcaacgggaccgatgtcacgtatggcgcgccgtacgaacgcgacatcggc
atggtgttccagaactacgcgctgtttccgcacatgaccgtggcggagaacatcgccttc
ccgttgcagatgcgtcgcaccgacgcacaggccgcgcgcaagagggtcatggacgcgctg
gaaatggtgcatctgccgcacgtggcggagcgctatccgcgcgagctctcgggtgggcag
caacaacgtatcgcgctcgcgcgatgcatggtgtaccggccgtccatcatcctgatggac
gagccgctcggtgcgctcgacaagaagctgcgcgatcacatgcagctcgagatcaagcgc
attcaccgcgagctcggcaccaccatcgtgtatgtcacgcacgatcaggaagaggcgatg
acgatgtcggaccgcatttgcctgatgaacgcgggcgaaattgcccaactcggcacgccg
gacgatctgtacttccgtccgaagagcgtgttcgtggccgacttcctcggcgagtccaac
ctgctcgacgccaccgtgctcgagcgcgcgggcgatcaggtgcgcgtggccatgcccggc
gtgcagggctcgctcggcgccggcgccatggtctacgacccgcaggtcgagcgcggccgt
ccggtcaagctgatgctgcgtccgcagaacctgcacatccacgacgggcagcctgcggcc
gacggcatggccacgatctcggccaggctcaccgacatcatggtcactggcggcatgacc
aagctctacctgcaatcggcgctcaccgacggcgacgccggcaagtcgctggtggcggcg
tttcccacgcatcgtcagggcaaccgcttcgagatcggccagacgctcggtctcgcgtgg
cgtgccgacgacgccgtggcgatcgcggggtaa
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