Pandoraea pnomenusa RB38: DA70_09965
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Entry
DA70_09965 CDS
T03067
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00330
Arginine and proline metabolism
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DA70_09965
Enzymes [BR:
ppno01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
DA70_09965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHN74744
LinkDB
All DBs
Position
1387197..1389482
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AA seq
761 aa
AA seq
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MKFRFPIVIIDEDFRSENISGSGIRSLAEAIEAEGMEVNGLTSYGDLTSFAQQASRASSF
ILSIDDDEFGTFSSEAGGEGEGELALAIINLRAFVQEVRRRNPDIPIFLYGETRTSRHIP
NDILRELHGFIHMFEDTPEFVARHIIREARSYLDSLPPPFFRSLTHYAADGSYSWHCPGH
SGGVAFLKSPVGQMFHQFFGENMLRADVCNAVEELGQLLDHNGPVGASERNAARIFNADH
LFFVTNGTSTSNKIVWHATVAPGDIVVVDRNCHKSILHAITMTGAVPVFLTPTRNHLGII
GPIPKSEFEPEVIRAKIEANPFAREVLERDPNAKPRILTITQSTYDGVIYNVEMIKELLG
NNIDTLHFDEAWLPHAAFHEFYRDMHAIGEGRPRSSEATVYATHSTHKLLAGISQASQIV
VQDSEARTFDTYRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIVEALDF
RRAMRKVASEYGDSWWFSVWGPENLGDEGTIQRDDWVLRANDRWHGFGDLADGFNMLDPI
KATIITPGLDVDGEFGESGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSM
VTELQQFKDDYDHNRPLWRVLPEFVAQFPRYERIGLRDLCDQIHSVYKANDVARVTTEMY
LSDMQPAMKPTDAFSKLAHRQIDRVPIDELEGRVTSVLLTPYPPGIPLLIPGERFNAAII
EYLRFARDFNERFPGFHTDIHGLVVEEVDGRPEYFVDCVRQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgttttccgatcgtcatcatcgacgaggacttccgctccgagaacatttcc
ggatccgggattcgctccttggcggaagccatcgaagccgagggcatggaagtcaacggc
ctcacgagctacggtgacctgacctcgttcgcgcagcaggcaagccgcgcctcgagcttc
atcctgtccatcgacgacgacgagttcggcactttctcgagtgaagcgggcggcgaaggc
gagggcgaactggcgctggccatcatcaacctgcgtgccttcgtgcaggaagtgcgccgc
cgcaacccggatattccgattttcctgtacggcgagacgcgcacctcgcgccacattccg
aacgacatcctgcgtgagctgcacggcttcattcatatgttcgaagacacgccggagttc
gtggcgcgtcacatcatccgtgaagccaggtcttacctcgactcgctgccgccgccgttc
ttccgctcgctcacgcattacgccgccgacggttcgtactcgtggcactgcccggggcac
tcgggcggcgtggcgttcctgaagagcccggtgggccagatgttccaccagttctttggc
gagaacatgctccgcgcggacgtctgcaacgccgtggaagaactcggccaactgctcgat
cacaacggcccggtgggcgcgtcggagcgcaatgcggcgcggattttcaatgccgaccat
ctgttcttcgtcacgaacggtacgtcgacctccaacaagatcgtgtggcatgccacggtg
gcgcccggcgacatcgtcgtcgtcgaccgcaactgccacaagtcgatcctgcacgcgatc
accatgacgggggccgtgccggtgttcctcacgcccacgcgcaaccacctcggcatcatc
ggaccgattccgaagtcggagttcgagccggaagtcattcgcgcaaagatcgaggcgaac
ccgttcgcgcgcgaagtgctggagcgcgatccgaacgccaagccgcgtattttgacgatc
acgcagagcacgtatgacggcgtgatctacaacgtcgaaatgatcaaggaactgctcggc
aacaacatcgacacgctgcatttcgacgaggcctggttgccgcacgcggcgtttcacgag
ttctatcgcgacatgcatgcgatcggcgaaggccgcccacgctcgtcggaagcgaccgtc
tatgccacgcactcgacgcacaagctgctcgccggcatttcgcaggcttcgcagatcgtg
gtgcaggactcggaggcccgcacgttcgacacgtatcgcttcaacgaggcatacctgatg
catacgtcgacctcgccgcaatacgcgatcatcgcgtcgtgcgacgtggccgcggccatg
atggagccgccgggcggcacggcgctggtcgaggaatcgatcgtcgaggcgctcgacttc
cgccgcgccatgcgcaaggtcgcctcggagtatggcgactcgtggtggttctcggtctgg
ggcccggagaacctgggcgacgaggggacgatccagcgcgacgactgggtgctgcgcgcg
aacgaccgctggcacggcttcggcgatctggccgacggtttcaacatgctcgacccgatc
aaggcgacgatcatcacgccggggctggacgtggacggcgagttcggcgagagcggcatt
ccggcggccatcgtcaccaagtacctggccgagcacgggatcatcgtcgagaagaccggc
ttgtattcgttcttcatcatgttcaccatcggcattacgaagggccgctggaactcgatg
gtgaccgaactccagcagttcaaggacgactatgatcacaaccgtccgctgtggcgggtg
ctgccggagttcgtggcgcagttcccgcgttacgagcgtatcggcctgcgcgatctgtgc
gatcagatccatagcgtgtacaaggccaacgacgtggcccgcgtgaccaccgagatgtac
ctctcggacatgcagccggcaatgaagccgaccgacgcgttctcgaagctggcacatcgc
cagatcgaccgggtgccgatcgacgaactcgaagggcgtgtgacgagcgtgctgctcacg
ccctatccgccggggattccgctgctgattccgggcgagcgcttcaacgccgccatcatc
gaatatctgcgattcgcgcgcgacttcaacgagcgtttcccggggttccataccgacatc
cacgggctcgtcgtggaggaggtggacggacgccccgagtacttcgtggattgcgtgcgc
cagtaa
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