Pandoraea pnomenusa RB38: DA70_10810
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Entry
DA70_10810 CDS
T03067
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00250
Alanine, aspartate and glutamate metabolism
ppno00310
Lysine degradation
ppno00350
Tyrosine metabolism
ppno00650
Butanoate metabolism
ppno00760
Nicotinate and nicotinamide metabolism
ppno01100
Metabolic pathways
ppno01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DA70_10810 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DA70_10810 (gabD)
00310 Lysine degradation
DA70_10810 (gabD)
00350 Tyrosine metabolism
DA70_10810 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
DA70_10810 (gabD)
Enzymes [BR:
ppno01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
DA70_10810 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
DA70_10810 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
DA70_10810 (gabD)
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Motif
Pfam:
Aldedh
Cecropin
Motif
Other DBs
NCBI-ProteinID:
AHN74898
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Position
complement(1193857..1195356)
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AA seq
499 aa
AA seq
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MSTSHPSTPARAHPALARLKDPALLRFDAYIDGTWTQADSQATFVVNDPATDAAIAHVAD
LGAKETERALVAAETALPEWRARTGKDRARIMRRWYDLIMQAQDDLGAIMTAEQGKPLAE
AKGEVAYGASFIEWFAEEAKRVDGDVLTSPEGGKRLLVLKQPIGVCASITPWNFPIAMIT
RKIAPAIAAGCTIVVKPARLTPLSALALAELAERAGLPRGVFNVVTSKNSSDVGDVLTGS
PRVRHLSFTGSTPVGARLMEQCAPTIKKVALELGGLAPFLVFDDADVDAAVEGCIASKFR
NAGQTCVCANRIYAQDGIYDAFVEKLTAAVSRLRVGNGFEPGVAIGPLIEDAAVEKVERH
VADAVARGGRVTVGGKVLHGRFFEPTVVADASADMLVAQEETFGPVAPVFRFRDEAEGIR
LANATDFGLASYFFARDVGRVWRVAEGIEAGMVGINTGLISNEVAPFGGVKQSGLGREGS
KYGIDEYLELKYLCLAGMG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacatcccacccatccacgcccgccagggctcacccggcactggctcgtctgaaa
gatccggcactgctcaggttcgacgcgtatatcgacggcacctggacgcaggccgactcg
caggcgactttcgtcgtcaacgacccggccaccgacgcagcgatcgcccacgtcgccgat
ctgggcgccaaggaaaccgagcgcgccctggtcgccgccgaaaccgcactgcccgagtgg
cgcgcccgtaccggcaaggatcgggcgcgcatcatgcggcgctggtatgacctcatcatg
caggcacaggacgacctcggcgccatcatgaccgccgagcaaggcaagccgctcgccgag
gccaagggcgaggtcgcctacggcgcctccttcatcgagtggttcgccgaagaagccaag
cgggtggacggcgacgtcctcacttcccccgagggcggcaagcgcttgctggtgctcaag
cagccgatcggcgtatgcgcctcgatcaccccctggaatttcccgatcgcgatgatcacg
cgcaagatcgcgccggccatcgcggccggctgcaccatcgtggtcaagcccgcgcgactc
acaccgctctcggcgctggccctggccgaactggccgagcgcgccgggctgcctcgaggt
gtcttcaacgtggtgacgtcgaaaaactcgtccgacgtgggcgacgtgctcaccggcagc
ccgcgcgtgcggcacctgtcctttacgggctcgacgccggtcggcgcccgactcatggag
cagtgcgcgccgaccatcaagaaggtcgcgctcgagctgggcggtctcgcaccgttcctc
gtattcgacgacgccgatgtcgacgccgccgtcgaaggctgcatcgcctcgaagttccgc
aatgccgggcaaacatgcgtatgcgcgaaccgcatctacgcgcaagacggcatctacgac
gccttcgtcgaaaaactcaccgctgccgtgagccggctgcgcgtgggcaacggcttcgaa
ccgggcgtggcgatcggcccgctcatcgaagacgccgccgtcgaaaaagtcgagcgccac
gtggccgacgccgtcgccagggggggacgtgtgacggtcggcggcaaggtcctgcacggc
cgattcttcgaaccgacggtcgtggccgacgcgagcgcggacatgctcgtcgcgcaggaa
gagaccttcggaccggtggcaccggtcttccgcttcagggatgaagccgagggcatccgg
ctggccaacgcgacggacttcggcctggcgtcctatttcttcgcccgcgacgtcggacgc
gtctggcgcgtcgccgaaggcatcgaagccggcatggtcggcatcaacaccggcctgatc
tccaacgaagtcgccccgttcggcggcgtcaaacagtccggcctgggacgcgaaggttcg
aagtacggcatcgacgagtatctcgagctgaagtatctctgcctcgccggcatgggctga
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