Pandoraea pnomenusa RB38: DA70_11085
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Entry
DA70_11085 CDS
T03067
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00362
Benzoate degradation
ppno00624
Polycyclic aromatic hydrocarbon degradation
ppno01100
Metabolic pathways
ppno01120
Microbial metabolism in diverse environments
ppno01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DA70_11085
00624 Polycyclic aromatic hydrocarbon degradation
DA70_11085
Enzymes [BR:
ppno01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
DA70_11085
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
AHN74952
UniProt:
A0A378YVJ5
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All DBs
Position
1134665..1135375
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AA seq
236 aa
AA seq
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MSNTTTVLRPRDWDSHPRLIDSGYKSTALRGPKQLLIPVKQNLADLRSPVYGNGIIGALD
GDLTRNAVRNGEPLGERMIVTGRVLDEGGRPVPNTLVELWQANACGRYVHKVDQHDAPLD
PNFLGAGRALTDAQGRYRFLTIKPGAYPWKNHHNAWRPQHLHFSVFGHYFATRLVTQMYF
PGDPLLAYDPIFQATPAHARDRLIARFSMDITEPEYALGYEFDIVLRGADQTPMES
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacgacaaccgtcctgcgcccgcgcgactgggattcgcatcccaggctcatc
gacagcggatacaagtccacggcgctgcgcggtcccaagcagttgctcatccccgtcaag
cagaacctcgccgatctgcgctcgccggtctacggcaacggcatcatcggtgcgctcgac
ggtgatctcacgcgtaatgcggtgcgcaacggcgagcccctcggcgagcggatgatcgtc
acgggccgcgtgctcgacgagggcggccgtccggtcccgaacacgctcgtggagctgtgg
caggccaacgcctgcggccgctacgtgcacaaggtggaccagcacgacgcaccgctcgac
ccgaacttcctcggcgccggccgtgcgctgaccgatgcgcagggccgctacaggttcctg
accatcaagccgggcgcctatccgtggaagaaccaccacaatgcatggcgtccgcagcat
cttcacttttcggtgttcggccattacttcgcgacccgtctggtgacgcagatgtatttc
ccgggcgacccgctgctggcctacgatccgatcttccaggccacgccggcgcacgcccgg
gaccgtttgatcgcgcgcttctcgatggatatcacggagcccgagtacgcgctgggttat
gaattcgacatcgtgctgcgcggtgccgaccaaacgccgatggagtcctga
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