Pandoraea pnomenusa RB38: DA70_11195
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Entry
DA70_11195 CDS
T03067
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA70_11195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_11195
Transporters [BR:
ppno02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DA70_11195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Phosphonate-bd
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AHN74970
UniProt:
A0A378YWC7
LinkDB
All DBs
Position
1100340..1101839
Genome browser
AA seq
499 aa
AA seq
DB search
MRNVLLDMALAALLATGTASAMAQSTLRIGLQEDIGSLDPARSSQVVDRMVLRSLCSSLV
DIGTDLKFVPMLATSWSVSADGKTWTFKLRQGVKFHDGEPFDAKAVKANLDRARSLPASN
RKSELSSIDRVDAVDDHTVNIVLKAPDSALLATLSDRAGMMLAPKTLADDAAVQSHPVCS
GPYKFVQRVQNDRVVLEKFAGFWEADKYPIQKVIYLPIPDTTVRLANVRSGSLDMLERLA
PSDVKSVKRDANLNFVSIDGLGYYGLTFNVAANAPKALRDKRVRQAFDLAIDRDAINQVI
GGGIFTPANQALPRSGQYYDTAIKTTKRDVAKAKALLKSAGFDKIDVTLSFGNNTVANQM
AQMLQAMLAEAGIQLKLRPMDYAAALDAAHRGDFDVLYNGWSGRVDPDGNLHQFVTCKGN
LNYGQYCNAEVDKLLNEGRVKSTVAERKPIYDAANKILSDEDPILYLYVQPWPYVLSKKV
QGFVPYPDGLIRLRGVSVK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgttctgctcgatatggcgttggcggcgcttctcgcgaccggcaccgcttcg
gcgatggctcagtcgacgcttcgcatcggcctgcaggaagacatcggttcgctcgatccg
gcgcgcagttcgcaggtcgtcgaccgcatggtgctgcgctcgttgtgcagctcgctggtc
gacatcggcacggatctgaagttcgtgccgatgctggccacctcgtggagcgtgagcgcg
gacggcaagacgtggaccttcaaattgcgccagggcgtgaagttccacgacggcgaaccg
ttcgacgccaaggccgtcaaagcgaacctcgatcgcgcgcgcagcttgccggccagcaat
cggaagagcgagctgtcgtcgatcgatcgtgtcgacgcggtggacgaccacacggtcaac
atcgtgctcaaggcgcccgattccgcgctgctcgccacgctgtccgatcgcgcgggcatg
atgctcgcgcccaagaccctcgccgacgacgcggccgtgcaatcgcacccggtctgttcc
gggccgtacaagttcgtgcagcgcgtgcagaacgatcgtgtggtcctggaaaaattcgcg
gggttctgggaggcggacaagtatcccatccagaaggtcatctacctgccgattcccgat
acgaccgtgcggctggccaacgtgcgttccggctcgctcgacatgctcgagcgtcttgcg
ccgtccgacgtcaaatcggtcaagcgcgatgcgaatctgaacttcgtgtccatcgacggt
ttgggctactacggattgacgttcaacgtggcggccaacgcccccaaggcgttgcgcgac
aagcgtgtgcgtcaggcgttcgaccttgccatcgaccgcgacgcgatcaaccaggtgatc
ggcggcggcatcttcacgcccgcgaatcaggcgttgccgcgctcgggccagtactacgac
accgccatcaagacgaccaaacgcgacgtggcgaaggcgaaggcgctgctcaagtcggcc
ggcttcgacaagatcgacgtgacgctgagtttcggcaacaacacggtcgccaatcagatg
gcgcagatgctgcaggccatgctggccgaggcgggcatccagctcaagctgcgcccgatg
gactatgctgccgcgctcgatgcggcgcatcgcggcgacttcgacgtgctctacaacggc
tggtccggtcgtgtcgacccagatggcaacctgcaccagttcgtgacctgcaagggcaac
ctgaactacggtcagtactgcaatgccgaggtcgacaagctgctcaacgaggggcgcgtg
aaatcgaccgtggccgagcgcaagcccatctacgacgcggccaacaagattctgtccgac
gaagatcccatcttgtacctgtacgtgcaaccgtggccgtacgtgctcagcaagaaggtg
caggggttcgtgccttaccccgacgggctgattcgcctgcgcggcgtgagcgtgaagtaa
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