Pandoraea pnomenusa RB38: DA70_13370
Help
Entry
DA70_13370 CDS
T03067
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DA70_13370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_13370
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DA70_13370
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DA70_13370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_21
AAA_23
RsgA_GTPase
nSTAND3
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_25
Viral_helicase1
cobW
LNP1
Motif
Other DBs
NCBI-ProteinID:
AHN75340
LinkDB
All DBs
Position
complement(610076..612940)
Genome browser
AA seq
954 aa
AA seq
DB search
METIRIRGARTHNLKNVNLDLPRHQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHGLPLESQSVSQMVDAVLALPEDTKLMILAPIVVDRKGEHADLFDSMQAQGFVRFRIR
SGGGAANEGTARVYDIDALPKLKKTEKHSIDVVIDRVKVRADLKQRLAESFETALRLADG
RAVALEMDTDKEHVFSSKFACPVCSYSLQELEPRLFSFNNPMGACPTCDGLGQMTFFDPK
RVVAFPALSLASGAIKGWDRRNQFYFQMLQSLAAFYDFDVDTPFEDLPEATQKIVLYGSG
EQEIPFTYVNEKGRTSVRSHAFEGIIPNLERRYRETDSVAVREELAKYQNNRACPDCEGS
RLRREARFVKVGEDKQARAIYEIGNLPLRDALGYFHELVLHGAKREIADKIVKEIVARLS
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMILASDYVVDMGLGAGIHGGKVIAQGSPAQIESAPESLT
GQYLSGARRIEVPAERHAPGEDHLRIVDATGNNLKHVNLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVARHLYGSSAEPAPYEQIDGLEHFDKVINVDQSPIGRTPRSNPATYTGVFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKR
YNRETLEVQYKGRNISEVLDMTVEQAHEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLTVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAANKASFTGKYLAPLLARAK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccattcgtattcgtggggcacgcacccacaacctcaagaacgtcaacctcgac
ctgccgcgccaccagctggtcgtgattaccggcctgtccggctccggcaagtcgtcgctc
gccttcgacacgctctacgcggaaggtcagcgccgctatgtcgagagcctgtcggcgtac
gcccgtcagttcctgcaactgatggaaaagccggacgtcgacctcatcgaaggcctgtcg
cccgcgatttccatcgaacagaaggccacgtcgcacaacccccgttcgacggtcggcacc
gtcacggaaatccacgattacctgcgcctgctctacgcccgcgtgggcacgccctactgc
cccgatcacggcctgccgctcgaatcgcaaagcgtctcgcagatggtcgatgccgtgctc
gcgctgcccgaagacaccaagctcatgatcctcgcgccgatcgtcgtcgatcgcaaaggg
gaacatgcggacctgttcgattcgatgcaggcgcaaggcttcgtgcgctttcgcattcgt
tccggtggcggcgcggcgaatgaaggcaccgcacgcgtctacgacatcgacgcgctgccc
aagctcaagaagacggaaaagcactcgatcgacgtggtgatcgaccgcgtgaaggtgcgc
gccgatctcaagcaacgtctggcggagtcgttcgagacggcactgcgtctggccgacgga
cgcgccgtcgcgctcgagatggacaccgacaaggagcacgtcttcagctccaagttcgcc
tgcccggtgtgctcgtattcgctccaggagctcgagccacgcctgttctcgtttaacaac
ccgatgggcgcctgcccgacctgcgacggtctgggacagatgacgttcttcgacccgaag
cgtgtcgtggccttccccgcgctctcactcgcttccggcgcgatcaagggctgggatcgt
cgcaatcagttctacttccagatgctgcaaagcctggcggcgttctacgacttcgacgtc
gacacgccgttcgaggacttgcccgaggccacgcagaagatcgtgctgtacggctccggc
gagcaggagattccattcacctacgtgaacgagaagggccgcacgtcggtgcgctcgcat
gcgttcgaaggcatcatcccgaacctggagcgccgctatcgcgagaccgactcggtcgcc
gtgcgcgaggagctcgccaagtaccagaacaaccgggcctgccccgattgcgagggcagt
cgcctgcgccgcgaggcgcgcttcgtcaaggtcggcgaagacaagcaggcccgcgccatc
tacgagatcggcaacctgccgctgcgcgacgcgctgggctatttccacgaactggtgctg
catggggccaagcgcgagatcgccgacaagatcgtgaaggaaatcgtggcgcggctctcg
ttcctgaacaacgtcggcctggactacctgtcgctcgagcgcagcgccgacacgctctcg
ggcggcgaagcgcagcgcattcgtctcgcgtcgcagatcgggtccggtctcacgggcgtg
atgtacgtgctcgacgaaccctcgatcgggctgcaccagcgcgacaacgatcgcctcatc
ggcacgctcaagcacctgcgcgacctcggcaactcggtcatcgtggtggagcacgacgag
gacatgatcctcgcgagcgactatgtcgtcgacatgggactcggcgccggcattcacggc
gggaaagtgatcgcgcaaggcagccccgcgcagatcgaaagcgcgccggaatcgctcacc
gggcagtacctgtcgggcgcgcgccgcatcgaagtgccggccgagcgtcatgcccccggc
gaggaccacctgcgcatcgtcgacgccacggggaacaacctcaagcacgtcaacctcgat
ctgccggttggcctgctcacctgcgtgacgggcgtttccggatcgggcaagtcgacgctg
atcaacgatacgctgtaccacgccgtcgcgcgccatctctacgggtcgtcggccgagccg
gcaccgtacgaacagatcgacggactcgagcacttcgacaaggtcatcaacgtcgaccag
tccccgatcggccgcacgccgcgctcgaacccggccacgtacaccggcgttttcacgccg
attcgcgagctcttcgcgggcgtgcccgccgccaaggaacgcggttacgatcccggccgc
ttctcgttcaacgtgaagggcgggcgctgcgaggcctgtcagggcgacggcgtcatcaag
gtcgagatgcacttcctgccggatgtgtacgtgccctgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgaagtgcagtataagggccgcaacatctcggaggtcctcgac
atgacggtcgagcaggcacacgagttcttcaagccggtgccggtcgtggcgcgcaagctc
aagacactgctcgacgtgggcctgggctacatccgcctgggccagtcggccaccacgctc
tcgggcggcgaagcgcagcgcgtgaagctctcgctcgaactctccaagcgcgatacgggc
cgcacgctgtatatccttgacgaaccgaccaccgggctgcattttcacgatatcgaactg
ctcctcaccgtgattcatcggctgcgcgaccagggcaatacggtcgttatcatcgagcac
aatctcgatgtgatcaaaacggcggactgggtgatcgatctcggaccggaaggcggtgcg
ggcggcgggcagatcatcgcgcagggcacgcccgaacaagtggcggccaacaaggccagt
ttcaccggaaagtaccttgccccgctgcttgcgcgcgcgaagtaa
DBGET
integrated database retrieval system
