Pandoraea pnomenusa RB38: DA70_16320
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Entry
DA70_16320 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppno03016
]
DA70_16320
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DA70_16320
Transfer RNA biogenesis [BR:
ppno03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DA70_16320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF3261
Motif
Other DBs
NCBI-ProteinID:
AHN75837
LinkDB
All DBs
Position
complement(5372261..5372926)
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AA seq
221 aa
AA seq
DB search
MRSARLAFDRTRVYYESHQQVPIPGVLMRLFLALWPGPGVRAQLHEWAVSAHAECGGRVL
RAQTLHLTLAFLDEVDPARLPILLALMQRTPLAPFTLTFDHLGFWSDRKIVWAGAAAVPD
NLVATRDALLSQWGATGARVLTQAFRPHVTLLRHARRAPSDPHPRPLLWQCDGYALVHSV
RTPRGPHYRVLAEHRGTTPEGFLAAPDENSSMPATQYGIVG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgcggagcgcgcggctggcattcgaccggacgcgcgtctactatgagagtcatcagcag
gttccgatccctggtgttctcatgcgacttttcctcgccctgtggcctgggccgggcgta
cgcgcgcagcttcatgaatgggccgtgtcggcgcatgccgaatgcggcggacgtgtgctg
cgcgcccagaccctgcatctcacgctggcctttctcgacgaagtggatccggcccgcctg
ccgatccttctggcactcatgcagcgcacaccgctcgcaccgttcacgctcaccttcgat
catctcggcttctggtcggatcgcaagatcgtttgggccggtgcggcggccgtgccggac
aatctcgtcgcgacacgcgatgcgctgctctcgcaatggggcgccaccggggcccgcgtg
ctcacgcaagcgttccgcccgcacgtgacactgctgcgccatgcgcggcgcgcgccgtcg
gacccgcatccgcgtccgctcctctggcaatgcgacggctatgcgctcgttcattccgtt
cgcacgccgcgcgggccgcactaccgtgtgctcgccgagcatcgcggcacgacgccggaa
ggctttttggccgcgccggacgagaattcgtcaatgcccgcaacgcaatacggtatagtc
ggatga
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