Pandoraea pnomenusa RB38: DA70_17060
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Entry
DA70_17060 CDS
T03067
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DA70_17060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_17060
Enzymes [BR:
ppno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DA70_17060
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DA70_17060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
zf-CHY
HypA
ADDB_N
AAA_16
AAA_22
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
AHN75973
LinkDB
All DBs
Position
5192445..5194829
Genome browser
AA seq
794 aa
AA seq
DB search
MPTIARVALDTPLPTLFDYRLDQAATLGQLVQVPFGRRQVVGVVWELTQRSDVPSAKLRD
VTSVWHELPALGDDWRDLMQFAARYYQRGIGEVALPAVPGHLRTPMRWSRLLARRGVQRY
RLADGALPALMENVPARLRAQRRLAEGLAQAGTLDADEARALCAKAADVLKQWAAAGWVV
VETVPFHETVREADECSDVIDGMDELRVSGATEHPVADAAPGAAPGRTLTAGQADAVAAI
HGALVAAGARRLAATQAKPDTTPADDTPACTPFLLYGVTGSGKTEVYLRAVAEALREPEA
QVLVLVPEINLTPQLEGVFRTRFPNETLVTLHSGLAEGERARHWLAAHRGEARVVLGTRL
AIMASLPHLRLIVIDEEHDPSYKQQEGLRYSARDLAIWRANRLRIPVVLGSATPSLDSWR
RADQGRYVRLAMPERATPDAVLPRVSLIDMEIERKRQRAVHEGLSQPLLAALRARLDAGE
QSLLFLNRRGYAPVLNCDACGWISDCRRCSAHMVLHKPERRLRCHHCGAEARIPHACPDC
GNLDLAPLGRGTQRIEEALTAHFPDARLARIDADSTRRKGSAQALFAQVHAGEVDILIGT
QMVAKGHDFRNVTLVGVVNADSALFSHDFRAAERLFAQLMQVAGRAGRAARADGPGDVLI
QTRYASHPLFAALMRHDYPGFAAQQLEERRVALLPPFTHQALLRAEARKLDDAMAFLRQA
REIAATPALNDPRISLWDPVPMTMVRIAGTERAQLVVESPHRGALQRFLTQWMSELRTLR
APVRWHLEVDPLEI
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
gtgcccactatcgcccgcgtggccctcgatacgccacttcccaccttgttcgactatcgt
ctcgatcaggccgcgaccctcggtcaactggtccaggttccgttcggacgacgacaggtg
gtgggtgtcgtctgggaattgacgcagcgcagcgacgttccgtccgcgaagctgcgcgac
gtgacatcggtatggcacgaattgccggcgctcggcgacgactggcgcgacctgatgcag
tttgccgcgcgttattaccagcgcggcattggggaagtggcgctgcccgccgtgcccgga
catcttcgtacgccgatgcgatggtcgcgcctgctcgcccggcggggcgtgcagcgctat
cgcttggccgacggtgcgctgccggcgctcatggaaaacgtgcccgcccggctgcgcgcg
cagcgccgcctggccgaaggactggcgcaagccggcacgctggacgccgacgaggcgcgc
gccctctgcgcgaaagcggccgacgtgctcaagcagtgggccgccgccggctgggtcgtg
gtggaaacggtgccgtttcatgaaacggtgcgcgaagcggacgaatgcagcgacgtcata
gacgggatggacgagttgcgcgtctcgggcgccacggaacaccccgtggccgatgctgca
cctggtgccgcccccggccgcaccctgacggccggccaggccgacgccgtggccgccatt
cacggggcgctcgtcgccgccggggcacggcgcctcgccgccacgcaggcgaagccggac
acgacgcccgccgacgacacgcctgcgtgcacgccgttcctcctttacggggtgaccggc
agcggcaagaccgaggtgtacctgcgcgccgtcgccgaagcgctgcgcgagcccgaggcc
caggtgctcgtgctcgtaccggagatcaacctgacgccgcagctcgaaggcgtctttcgc
acgcggttcccgaacgagacgctcgtcaccctgcacagcgggctggccgaaggcgagcgc
gcccggcattggcttgcggcgcaccgcggcgaagcgcgcgtggtgctcggcacacggctg
gcgattatggcgtcactgccgcatctgcgcctgatcgtgatcgacgaagagcacgatccg
tcgtacaagcagcaggagggcctgcgctattcggcgcgagacctcgccatctggcgggca
aaccggttgcgcattccggtggtgctcggctcggccacgccgtcgctcgacagctggcga
cgcgccgatcagggccggtacgtgcgactcgccatgcccgagcgcgcaaccccggacgcg
gtgctgccgcgcgtgtcgctcatcgacatggaaatcgagcgcaagcgccagcgcgccgtt
cacgaagggttgtcgcaaccgctgctcgccgctctccgcgcgcgtctcgacgccggcgag
caaagcctgctgttcctgaatcgacgcgggtacgcgcccgtgctcaattgcgatgcctgc
ggctggatcagcgactgccgccgttgcagcgcgcacatggtgctgcacaagccggaacgc
cgcctgcgttgtcatcattgcggcgccgaagcgcgcatcccgcacgcctgccccgactgc
ggcaacctggatctcgcgccgctcggacgtggcacccaacgtatcgaggaagcgctgacg
gcccacttccccgacgctcggctcgcccgcatcgacgccgacagcacgcgccgcaagggc
agcgctcaggcgctcttcgcgcaggtccacgccggcgaggtcgacatcctcatcggcacg
caaatggtcgccaagggacacgacttccgcaatgtcacgctcgtgggcgtggtcaacgcc
gacagcgcactgttctcgcacgactttcgggccgccgaacgactcttcgcacaactcatg
caggtggccggtcgcgccggccgggccgcccgggccgacggccccggcgacgtgctgatc
cagacgcgctacgcgtcgcacccgttgttcgcggcgctcatgcgtcacgactaccccggc
tttgccgcgcagcagctcgaggagcgacgcgtcgcactgctgccgccgttcacgcaccag
gccctgctgcgcgccgaggcccgcaagctcgacgacgccatggctttccttcggcaagct
cgtgagatcgccgccaccccggcgctgaacgacccgcgcatctccctgtgggatccggtg
ccgatgacgatggtccggatcgcgggcacggagcgtgcgcaactcgttgtggagagcccg
caccggggcgcgctccagcgctttctcacgcaatggatgagcgaactgcgcaccctccgg
gcaccggtgcgatggcacctcgaagtggatcctctcgaaatataa
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