Pandoraea pnomenusa RB38: DA70_18070
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Entry
DA70_18070 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppno02044
]
DA70_18070
02035 Bacterial motility proteins [BR:
ppno02035
]
DA70_18070
Secretion system [BR:
ppno02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DA70_18070
Bacterial motility proteins [BR:
ppno02035
]
Pilus system
Pilus assembly proteins
DA70_18070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
Secretin_N
T2SSM_b
Motif
Other DBs
NCBI-ProteinID:
AHN76143
LinkDB
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Position
complement(4974472..4977123)
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AA seq
883 aa
AA seq
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MRGDSSPPDDVRDIFHETRDRWRARWHAWMSVPPAEWPRAVRWGLAGAAWAIGLALAWSV
WWLVGLPARATLQKDLAVAQQTLDRANEAARRLPILMQTLRDAQAQAAAWRRLLPAAGAG
QTSSGAASHGEDDVPAPSDDPPSGWRADLERLLARYGLTLTSARPGPSASKGEIELERAE
MRVQGEVAHLLRWLAEIDQMPRHLAVERFSLEGAGMGASSEAPSTLAITVAAYRWRRPAE
LAPRAGEQALPALPEPPPPWQMPHDTVDVFRTPLTRHAAQDAVTMAASGPVAPAATPVGA
MRAGSRRVVLRQTSAARLTATWSDVSPPHGKGARVAGGGVTQREDAADVDVTLHGVPATD
ALRAFARLTGRSIVIGEHIAGRIDMEVRGVTAETAFDVMVRSAGLGVQSVNGVDWIAPRA
DLLADEQTRLEAASKREALLPLASRRFVLNYPRALALREIILGEKDSKGQRLLSPRGSLI
ADPRTNQLFVTDLPEKLEALASFIARIDVPVRQVLIEARIVEADDRFSESLGVRLAARDG
GADGNARGKAAKSGDASGTSRDADGGQGRRGDTGADDRFRGSGVDIGLPAAALAGVVPPS
LAITLFGRSATRFLQLELSALETSGRGRVVSRPRIVTADKIQAVIEQGTELPYQTRGGRR
SAASIQFRKATLRLEVTPLITPDGQVILDVDVRKDSVGQQVAEGFAVDTRHVKTQVQVEN
GGTVAIGGIYQEERRDRRASVPWLGDVPLLGALFRNRSNEDRRTELLVFLTPSVVPRGVP
DEARAAPTLEPAPNRAAAGAAPGPATTPSSPSRDDLPAGHRRLTGALFEATRSARPTHIP
VLSGVGTQISAIYAGKRNTCRTDGGGQDHGWARSGTTSGTAVL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtgattcgagtccgcccgacgatgtgcgggacatcttccatgagacgagggat
cgatggcgcgcgcgctggcacgcctggatgtcggtgccgccggccgagtggccgcgcgcg
gtgcgctggggactcgccggggccgcgtgggcaatcgggttggcgctcgcgtggtcggtc
tggtggctggtcggactgccggcccgcgcgacgttgcagaaggacctggccgtcgcgcaa
cagacgctcgatcgtgccaatgaggcggcgcgtcgcttgccgatattgatgcagacgcta
cgcgatgcacaggcgcaagctgcggcatggcggcgtttgctgccggcggcgggcgccggg
cagacatccagcggggcggcgtcacacggcgaagatgatgtgcccgcgccgagcgacgat
ccaccgtcgggatggcgcgccgatctcgagagacttctcgcgcggtacgggttgacgttg
acctcggccagaccgggcccctccgcgtcgaagggcgagatcgagctggagcgagccgaa
atgcgcgttcagggcgaggtggcgcatttactccgctggctggccgagattgaccagatg
ccacgccaccttgccgtcgagcggttctcgttggagggcgcgggtatgggggcgtcgagc
gaggcgccgtcgacgttggcgatcacggtagccgcctaccgctggcgccggcctgccgag
cttgctccccgagccggcgagcaggcattgcccgcacttcccgaaccgccgccgccatgg
cagatgccgcatgacacggttgacgtctttcgcaccccgctcacccgccacgccgcgcag
gacgcggtcacgatggcggcgtccgggccggtggccccggccgcaacccctgtaggcgcg
atgcgagcgggatcgcgacgcgtggtgttgcggcaaacgtccgcggcgcgactcacggcg
acgtggagtgacgtatccccaccgcacggcaaaggcgcacgcgtggcaggaggaggtgtt
acgcagcgagaagacgcggcagatgtcgacgtgacgctccacggcgtgccggcgaccgac
gcattgcgggcattcgcacgtctgaccgggcgcagcatcgtgatcggagagcacattgca
ggtcgtatcgacatggaagtgcggggagtgaccgcggagacggcattcgacgtgatggtc
cgcagcgccggactgggcgtgcaatcggtgaacggcgtggactggatcgcgccgcgtgcc
gatctgctggccgacgaacagacgcgactggaagcggcgtccaagcgcgaggccctgctc
cccctggcgagccgccgcttcgttctgaactatccgagagcgctggcgcttcgcgaaatc
atcctgggagagaaagacagcaaggggcaacgtctgctgtcgccgcgaggcagcctgatc
gccgaccctcggaccaaccagttgttcgtgaccgacctgccggagaaactcgaagcgctg
gcgtcgttcatcgcgcggatcgatgtgccggtcaggcaagtgctgatcgaggcgcgaatc
gtcgaggccgacgatcggttcagcgaatcgctcggtgtccggctggccgcacgcgacggc
ggcgctgacggcaacgctcgcggcaaggcggcgaaatcgggcgacgcatcgggaacttcg
cgcgatgccgacggcggccaggggcggcgcggcgacactggcgcggacgaccgcttccgg
ggcagcggcgtcgacatcgggctacccgcggcggcactggcgggggtcgtgccgccaagc
ctggcgataacactgtttggccggtctgcgacccgctttctgcaactggagctctcggcg
ctggaaacgtccgggcgcggacgcgttgtgtcacgcccgagaatcgtgactgccgacaag
attcaggcggtcatcgagcaaggcacggaattgccctatcaaacccgcggcggccggcga
agcgccgcgtcgatccagttccgcaaagcgacgctgcgtctggaggtcacgcccctgatt
acgccggacggtcaggtaattctggatgtcgacgtgcgcaaggatagtgtgggccagcag
gttgccgagggatttgccgtggatacccggcacgtcaagacccaggtgcaggtcgagaac
gggggaaccgtcgcgatcggcggcatctatcaggaggagcgccgggaccgtcgcgccagc
gtgccatggttgggcgacgtgccgctgctgggggccttgttccgcaatcgatccaacgaa
gaccggcgcacggaattgctggtgtttcttacgccaagcgtggtgccgcgcggtgtgccg
gacgaggcccgggccgcgccaacgctggagccggcgccaaaccgagcggcggcgggagcc
gcacctgggccggcgacaacgccatcgtccccgtcgcgggatgacctgccggcagggcac
cgtcgcctcactggcgcgctcttcgaggcgacgcgttccgcacgcccgacgcatatcccg
gtattatcgggggttggaacccaaatatcagcgatttatgctggaaaacgtaatacttgt
cggactgatgggggcgggcaagaccacggttgggcgcgcagtggcacgacgtctgggacg
gcagttctatga
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