Pandoraea pnomenusa RB38: DA70_19770
Help
Entry
DA70_19770 CDS
T03067
Symbol
sucC
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00020
Citrate cycle (TCA cycle)
ppno00640
Propanoate metabolism
ppno00660
C5-Branched dibasic acid metabolism
ppno00720
Other carbon fixation pathways
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01120
Microbial metabolism in diverse environments
ppno01200
Carbon metabolism
Module
ppno_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppno_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DA70_19770 (sucC)
00640 Propanoate metabolism
DA70_19770 (sucC)
00660 C5-Branched dibasic acid metabolism
DA70_19770 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
DA70_19770 (sucC)
Enzymes [BR:
ppno01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DA70_19770 (sucC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
GARS_A
Citrate_bind
ATP-grasp
SAA
Motif
Other DBs
NCBI-ProteinID:
AHN76448
UniProt:
A0A378YKF1
LinkDB
All DBs
Position
complement(4607629..4608795)
Genome browser
AA seq
388 aa
AA seq
DB search
MKIHEYQGKEILRKFGVAVPRGIPAFSVDEAVKAAEELGGPVWVVKAQIHAGGRGKGGGV
KVAKSIEQVREYAGQILGMQLVTHQTGPEGQKVNRLLIEEGADIKNELYVSLVVDRVTQK
IVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSVGLTDAQADDLAKKIGIPDASIPQARTI
LQGLYKAFWETDASLAEINPLNVSSNGTVTALDAKFNFDSNALYRHPEIVAYRDLDEEDP
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVTE
AFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMKGTNEDLGKKM
LAESGLPIISADSMEEAAQKVVAAAAGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcatgagtatcaaggcaaggaaatcctccggaaattcggagtcgcggtgccc
cgcggcattccggcgttttccgtggacgaggccgttaaggcagccgaagaactcggcggt
ccggtttgggtggtcaaggcccagattcacgcaggcggtcgcggcaagggcggcggcgtg
aaggttgccaagtcgatcgagcaagtgcgcgaatacgccggccagatcctcggcatgcaa
ctggtcacgcatcagaccggtccggaaggccagaaggtcaatcgcctgctgatcgaagaa
ggcgccgatatcaagaatgaactgtacgtcagcctggtggtcgaccgcgtcacgcagaag
atcgtgctgatgggttcgagcgaaggcggcatggacatcgaagaagtcgccgaaaagcac
ccggaactgatccacaaggtcatcgtcgagccgtcggtcggcctgaccgatgcccaggcc
gacgacctggccaagaagatcggcatccccgacgcttcgatcccgcaagcccgcacgatc
ctgcagggtctgtacaaggccttctgggaaacggacgcctcgctggccgaaatcaacccg
ctgaacgtgagcagcaacggcacggtcaccgcgctggacgccaagttcaacttcgactcg
aacgccctgtaccgtcacccggaaatcgtggcctaccgcgatctggatgaagaagatccg
gccgaagtcgaagcctcgaagttcgacctggcctacatctcgctcgacggcaacatcggc
tgcctggtgaacggcgccggcctggccatggccacgatggacaccatcaagctgttcggc
ggcgagccggcgaacttcctggacgtgggcggtggcgccacgacggagaaggtcaccgaa
gcgttcaagatcatgctgaagaacccgaacctgaccgccattctggtcaacatcttcggc
ggcatcatgcgttgcgatgtgatcgccgaaggcgtgatcgcagcctcgaaggccgtctcc
ctgaaggtgccgctggtcgtgcgcatgaagggcacgaacgaggacctgggcaagaagatg
ctcgccgaatccggcctgccgatcatttctgcggacagcatggaagaagctgcccagaag
gttgtcgcggccgccgcaggcaagtaa
DBGET
integrated database retrieval system
