KEGG   Pandoraea pnomenusa RB38: DA70_20565
Entry
DA70_20565        CDS       T03067                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppno  Pandoraea pnomenusa RB38
Pathway
ppno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DA70_20565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppno03019]
    DA70_20565
   03009 Ribosome biogenesis [BR:ppno03009]
    DA70_20565
   03036 Chromosome and associated proteins [BR:ppno03036]
    DA70_20565
Enzymes [BR:ppno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     DA70_20565
Messenger RNA biogenesis [BR:ppno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DA70_20565
Ribosome biogenesis [BR:ppno03009]
 Eukaryotic type
  90S particles
   RNase
    DA70_20565
 Prokaryotic type
  rRNA processing factors
   DA70_20565
Chromosome and associated proteins [BR:ppno03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     DA70_20565
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: AHN76590
LinkDB
Position
complement(4436816..4437736)
AA seq 306 aa
MEFLGDSILNCSVAAILFRRYGKLDEGDLSRVRANLVKQQSLYEIAQTLGVSDFLRLGEG
ELKSGGFRRPSILADTLEALFGAMYLDGGFEAAYAVIERLYAPVLEHVDPKTLGKDAKTL
LQEYLQGHKIALPQYTVIATHGAAHNQQFEVECTVPKLDIKVGGSGASRRAAEQAAAKKA
LEEVQKMPALAKPKAEKSAKAAKKRAAKAAASEAKKAEKAGQMSVVAPVEIREPKDVKDV
KDGRESREGTVGASSAPAMTASGGNVASRSATAEKAVERTPEKAQEKTSEKASDKIDAAK
QPPAAA
NT seq 921 nt   +upstreamnt  +downstreamnt
ttggagtttctcggcgattccattctgaactgttccgtcgcggccattctgttccgtcgc
tacggcaagctcgacgaaggcgacctctcgcgtgtgcgcgccaatctcgtcaagcagcag
tccctgtacgaaattgcgcagacgcttggcgtgtcggatttcctgcgtctgggcgaagga
gagctcaagagcggtggattccgtcgcccgtcgattctggccgatacgctggaggcgctg
ttcggcgcgatgtatctcgacggcgggttcgaagcggcttacgcggtgatcgagcgtctg
tatgcgccggtactggagcatgtcgatccgaagaccctcggcaaggatgcgaagacgctg
ctgcaggagtatctgcaaggtcacaagattgcactgccgcagtacacagtgatcgccacg
cacggtgccgcgcacaaccagcaattcgaggtggagtgcacggtgccgaagctggacatc
aaggtgggcggatccggtgccagccgtcgcgccgcggagcaggcggccgcgaaaaaggcg
ctggaagaagtgcagaagatgccggcacttgcgaagccgaaggccgagaagagcgccaag
gcggcgaaaaaacgcgcggcgaaggccgccgcctccgaggccaagaaggcggagaaggcg
gggcagatgagcgttgtggcgcctgtggaaattcgcgaaccgaaggacgtgaaggatgtg
aaggacggcagggagtcgagagaaggtaccgtcggtgcatccagcgcacccgccatgacg
gcatcgggcggcaacgtcgcgtcgcgctcggcgacggccgaaaaggcggtggagcgaacg
cccgagaaagcgcaggaaaagacatcggaaaaggcgtccgacaagatcgacgccgccaag
caacccccggcagccgcctga

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