Pandoraea pnomenusa RB38: DA70_20565
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Entry
DA70_20565 CDS
T03067
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DA70_20565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppno03019
]
DA70_20565
03009 Ribosome biogenesis [BR:
ppno03009
]
DA70_20565
03036 Chromosome and associated proteins [BR:
ppno03036
]
DA70_20565
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DA70_20565
Messenger RNA biogenesis [BR:
ppno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DA70_20565
Ribosome biogenesis [BR:
ppno03009
]
Eukaryotic type
90S particles
RNase
DA70_20565
Prokaryotic type
rRNA processing factors
DA70_20565
Chromosome and associated proteins [BR:
ppno03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DA70_20565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AHN76590
LinkDB
All DBs
Position
complement(4436816..4437736)
Genome browser
AA seq
306 aa
AA seq
DB search
MEFLGDSILNCSVAAILFRRYGKLDEGDLSRVRANLVKQQSLYEIAQTLGVSDFLRLGEG
ELKSGGFRRPSILADTLEALFGAMYLDGGFEAAYAVIERLYAPVLEHVDPKTLGKDAKTL
LQEYLQGHKIALPQYTVIATHGAAHNQQFEVECTVPKLDIKVGGSGASRRAAEQAAAKKA
LEEVQKMPALAKPKAEKSAKAAKKRAAKAAASEAKKAEKAGQMSVVAPVEIREPKDVKDV
KDGRESREGTVGASSAPAMTASGGNVASRSATAEKAVERTPEKAQEKTSEKASDKIDAAK
QPPAAA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttggagtttctcggcgattccattctgaactgttccgtcgcggccattctgttccgtcgc
tacggcaagctcgacgaaggcgacctctcgcgtgtgcgcgccaatctcgtcaagcagcag
tccctgtacgaaattgcgcagacgcttggcgtgtcggatttcctgcgtctgggcgaagga
gagctcaagagcggtggattccgtcgcccgtcgattctggccgatacgctggaggcgctg
ttcggcgcgatgtatctcgacggcgggttcgaagcggcttacgcggtgatcgagcgtctg
tatgcgccggtactggagcatgtcgatccgaagaccctcggcaaggatgcgaagacgctg
ctgcaggagtatctgcaaggtcacaagattgcactgccgcagtacacagtgatcgccacg
cacggtgccgcgcacaaccagcaattcgaggtggagtgcacggtgccgaagctggacatc
aaggtgggcggatccggtgccagccgtcgcgccgcggagcaggcggccgcgaaaaaggcg
ctggaagaagtgcagaagatgccggcacttgcgaagccgaaggccgagaagagcgccaag
gcggcgaaaaaacgcgcggcgaaggccgccgcctccgaggccaagaaggcggagaaggcg
gggcagatgagcgttgtggcgcctgtggaaattcgcgaaccgaaggacgtgaaggatgtg
aaggacggcagggagtcgagagaaggtaccgtcggtgcatccagcgcacccgccatgacg
gcatcgggcggcaacgtcgcgtcgcgctcggcgacggccgaaaaggcggtggagcgaacg
cccgagaaagcgcaggaaaagacatcggaaaaggcgtccgacaagatcgacgccgccaag
caacccccggcagccgcctga
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