Pandoraea pnomenusa RB38: DA70_21115
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Entry
DA70_21115 CDS
T03067
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA70_21115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppno03019
]
DA70_21115
Enzymes [BR:
ppno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DA70_21115
Messenger RNA biogenesis [BR:
ppno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DA70_21115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AHN76688
UniProt:
A0ABY6WIB3
LinkDB
All DBs
Position
4324719..4326245
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AA seq
508 aa
AA seq
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MIRKLIKKLLGKDGQPRAGATGPTPPGTPVVIPVGVHGIDPSLLSKNAVRVTDTLQQAGF
KAFIVGGAVRDLLLGIAPKDFDVATSATPEQVQRLFRRARIIGRRFQIVHVQFGQEIIET
STFRALVDAVDSEQIGARRPKKGELDRKTHVTDESGRVLRDNVWGEQEEDAARRDFTVNA
MYYDPAAQTVHDYHHGWEDIQKRVLRMIGDPATRYREDPVRMLRVVRFAAKLGFKIDEAT
AAPISQLAPLIDNVPAARLFDEMLKLLLSGHAWACVQQLRAQGLHHGLLPLLDVVLEQPM
GEKFVTLALANTDARIRAGKPVSPGFLFAALLWHLVLEKWQAYQRAGEYPIPALHLAMDD
VLDAQTGKLAIQRRFVADMKEIWGLQVRLDKRVGRTPLRLLEHPRLRAGYDFLLLRCESG
EVPAEAGQWWTDFLEGDAAARDALLAQGSAPSGTPAAKRRRRRRKPTGGRGGEGSGNEAS
AGDGNENATSENHGKRVSSRQHGSEGAS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcaaactcatcaagaagctgctgggcaaggacggtcagccccgcgccggcgct
accggcccgacgccgcccggcacccccgtcgtcattcccgttggcgttcacggcatcgat
ccctcgctgctttcgaagaacgccgtgcgcgtgaccgacacgttgcagcaggccggcttc
aaggccttcatcgtgggcggtgcggtgcgcgacctgttgctcggtatcgcgccgaaggac
ttcgacgtcgccacgagcgccacgcccgagcaggtgcagcgtctgttccgccgcgcccgc
atcatcggtcgccggttccagatcgtgcacgtgcagttcggtcaggagatcatcgagacc
tcgacgttccgcgcgttggtcgacgccgtcgacagcgagcagatcggtgcacgccgtccg
aaaaagggcgaactcgatcgcaagacgcacgtgaccgacgaatcgggccgcgtgctgcgc
gacaacgtctggggcgagcaggaagaagacgccgcgcggcgcgacttcaccgtcaacgcc
atgtattacgacccggccgcgcagacggtgcacgattaccatcacggctgggaagacatc
cagaagcgcgtgctgcgcatgatcggcgacccggccacgcgctatcgcgaagaccccgtg
cgcatgctgcgcgtggtgcgtttcgcggccaagctcggcttcaagatcgacgaggcgacc
gccgcgccgatctcgcagctcgcaccgctcatcgacaatgtgcccgccgcgcggctgttc
gacgagatgctcaagctgctgctctcgggccatgcctgggcgtgcgtgcagcaattgcgc
gcgcagggcctgcatcacggtctgctgccgctgctcgacgtcgtgctggagcagccgatg
ggcgagaaattcgtcacgctcgcgctcgccaacaccgacgcgcgcattcgcgccggcaag
ccggtttcgccgggcttcctgttcgccgccctgttgtggcatctcgtgctcgagaagtgg
caggcctaccagcgcgcgggcgagtacccgattccggcgctgcatctggccatggacgac
gtgctcgacgcccagaccggcaagctcgcgatccagcgccgtttcgttgccgacatgaag
gaaatctggggcctgcaggtgcgtctcgacaagcgcgtgggccgtacgccgctgcggctg
ctcgaacatccgcgcttgcgtgccggctacgacttcctgctgctgcgctgcgagtcgggc
gaggtgcccgccgaagccgggcagtggtggacggacttcctcgagggcgatgccgccgcg
cgcgacgccctgctcgcacaaggcagtgcaccgagcggtacgccggcggccaagcgtcgt
cgtcgccgtcgcaagccgacgggtggacggggcggtgaaggatcgggcaacgaagcgagc
gctggcgacggcaatgagaacgccaccagcgagaatcatggcaagcgggtatcatcgcga
cagcatggttccgaaggtgcttcatga
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