Pandoraea pnomenusa RB38: DA70_21700
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Entry
DA70_21700 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DA70_21700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_21700
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DA70_21700
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DA70_21700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHN76800
LinkDB
All DBs
Position
complement(4195841..4199257)
Genome browser
AA seq
1138 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDLAQAPGQGDAAANPFDTETIVVPSVAVRRRLELDYADIFG
VCANVRLTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWVRNSPRLAGYLAG
ADDVMRFELAERLAHIYDQYLTYRPNWLERWQAGEPIDAGTAPGWGQVQRDDEAWQSALW
RKVLAHLDIRERHPTLRAIDRIEQLTPETVPHGWPRRVSVFALSSMPPLSMALLKAMSRL
IDIHLYVLNPCESYWFDIVPPSRLSYLTRRDGAAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQPNPAPTLLAALQNGILTLDDGRHGTTQEVGADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLARAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFASILALPQQRVAASSLVELARTEAVAQRYDLGGNVLDAIQNWLHAAGARRGWRG
DALLRLEAPRQAADGDGEMAPALERHTLGDAMMRLFLGYALPDDALPVDDWLPVGGIEGG
RAELLGQLARLIDDLDMTSVALRTERTGLEWRDQLLAMLEQFFSDETRFADDVAEVRMAI
EQIGSAIADGAPEVRVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLPYRVVCM
IGMDDGVLPGRVRADEFDLMRVLPQRGDRQRRDDERNLFLDLMLSAQDRFLITYTGRSVR
DNAPLPPSTAVDELLDFTGQLLAPVSAGYTLEAQREARDALIVLHPLQPFSPAYFDGRDA
SLFSYDVSNGDAARALADPLAVPASDVPEAPFVREALPAVAQTHLTLDDLLRFWRHPGRA
WARDRLGLSLGEMLTEVEDDEPFVLDWAGRDALASRLLPRLLRDDARDARHHAEAVERIA
RVSHELPGGATGAVWRRRELGGLRALAAQVREAQAEGTQELLVALPLTPALPPSWKASTP
AAWHGDATLSAQCLLQGRLAPVSRYGLVMYRYGSMRPSDLLAAWLAHLALCAHLQQSAHV
GLDVAPRTLWYGENETFALRPVEDAAALLAQWVALYRLGQTRPLPFFARSAWKLASTGRA
AEAESAWQGSAFARGDADDPYTRLLWRGVENPLAPPFDLLANTVFGPVVQHLEVVEGA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgctccacctattcttttccaaccggttcaccacgctcgaagccgccttgctgcgcgat
ctcgcgcaagcgcccggccagggcgacgccgccgcgaatcccttcgacacggaaaccatc
gtcgtgccgagcgtggcggtgcggcgtcggctcgaactggactacgcggacatcttcggc
gtatgcgcgaacgtccggctgacctacctcgcccagtggctctgggacatggcgggcaag
ctgctcacggtgccggagagttcgccgttcgcgccggaccggctcgtctggccgctgtac
cagtgcctggcccagccgtgggtcaggaactcgccgcgtttggccggctatctggccggc
gccgacgatgtcatgcgcttcgaactggcggagcgtctggcgcacatctacgaccagtat
ctgacctatcggccgaactggctcgagcgttggcaggccggcgagcccatcgatgccggc
acggcgccgggctgggggcaggtgcagcgtgacgacgaagcgtggcagagcgcgttgtgg
cgaaaggtgctggcgcatctggacatccgcgagcgtcatcccacgctccgcgcgatcgac
cggatcgaacaactgacaccggaaacggtgccccatggctggcccaggcgtgtgtcggtg
ttcgcactgtcgtcgatgccgccgttgtcgatggcgctgctcaaggcgatgtctcgcctg
atcgacatccatctgtacgtcctcaatccgtgcgagagctattggttcgacatcgtcccg
ccgtcgcgcctgtcgtatctcacgcgccgcgatggcgcggcgcaccgggaggtggggcat
ccgttgctggccgagtggggtcgccagacgcagtcccacatcgacgcgctgtatgccgat
ctcgcgccacaggcggtcgaagaccgggcgctgttccaacccaatcctgccccgacgctg
ctcgccgccttgcagaacggcatcctcacgctggacgacggccgtcacggcaccacgcag
gaggtcggcgccgatggttcggtgcaggtgcatgtgtgccacagtctggcgcgccagatc
gaggtgcttcacgaccgactgcttgcctgcttcgacgaaattcccgatctgcggcccgac
gacgtgctgatcaccgtgcccgatctggcgcgcgcggcgccgctcatcgacgccgtattc
gggaccgccacgcctcgcattccctatctcgtgacgggcctgccgcccacgcgcaccaat
ccggtcgcgcgcgccttcgcttccatactggcattgccgcagcagcgggtggcggcatcg
agtctcgtggaactggcgcgcacggaagccgtggcgcaacgctatgacctcgggggcaat
gtgctcgatgccatccagaactggctgcacgccgccggcgcacgtcgcggctggcgcggc
gacgcgctgctgcggctggaggcaccgcggcaggccgcagacggcgacggggagatggcg
cccgcgctggagcgtcatacgttgggagacgccatgatgcggctgttcctcggctatgcg
ctgccggatgacgccttgccggtcgacgactggctgccggtcggcggtatcgagggcggt
cgtgccgagttgcttggccagctggcgcgtctgatcgacgatctcgacatgacgtccgtt
gcgctgcggacggagcgcacggggcttgagtggcgcgatcagttgctcgcgatgctggag
cagttcttctccgacgagacgcgcttcgccgacgacgtggccgaggtgcgcatggcaatc
gagcagatcggttcggccattgccgacggtgcaccggaggttcgcgtgccggttgaagtg
gtcgcccgcgtgctggccgacgccctcgacgatcccacgcgcggcggcgtgccctcgggg
cgcgtgacgtttgcggccatcccgagcctgcgtctcttgccgtaccgcgtggtgtgcatg
atcggcatggacgacggtgtacttcctgggcgcgtacgcgccgacgagttcgacctgatg
cgcgtgttgccgcagcgaggcgatcgtcaacgacgcgacgacgagcgcaacctcttcctc
gacctgatgctcagcgcccaggatcgttttctcatcacctataccgggcgcagcgtgcgc
gacaacgcacctctgccgccctcgaccgcggtcgacgaactgctcgatttcacgggacag
ttgcttgccccggtatctgcggggtacacgctcgaggcacagcgcgaggcgcgcgacgcc
ctgatcgtgctgcatccgttgcaaccgttttccccggcttatttcgacggtcgcgacgcg
tcgctcttcagctacgacgtgtccaacggcgacgccgcgcgggcgttggccgatcccctg
gccgtgcccgcatcagacgtccccgaggcgcccttcgtgcgagaagcgctgcccgccgtg
gcgcagacgcatctgacgctcgacgacctgctccgcttctggcggcatcccggccgtgcg
tgggcaagggaccgactgggactgtcgcttggggagatgctcaccgaagtggaggacgac
gagccgttcgtgctggattgggcaggccgcgatgcgctggcgtccaggctgctgccgcga
ttgctgcgcgacgatgcacgcgacgcccgccatcatgccgaagccgtcgagcgaatcgcc
cgcgtgagtcatgagttgccgggcggcgcgacaggcgcggtctggcgccggcgcgagctg
ggtggcttgcgcgcgctcgcggcgcaggtgcgcgaggcccaggccgaagggacgcaggag
ttactggtggccttgccgttgacgccggcactgccgccgtcgtggaaggcatcgacgccg
gccgcatggcacggtgacgcgaccttgtcggcgcaatgtctgttgcagggacggctcgca
ccggtttcgcgttacgggctggtgatgtatcgctatggcagcatgcgtccaagcgatctg
ctcgccgcgtggctggcgcatcttgccttgtgtgcgcatttgcagcagagcgcgcatgtc
ggtctggatgtggcgccaagaacgttgtggtacggcgagaacgagacgttcgcccttcgt
cccgtggaagacgcggcggcgttgcttgcccaatgggtggcgttgtaccggctgggccag
acgcgcccgctaccgtttttcgcacgcagcgcgtggaagctggcgagcaccggcagggcc
gcagaggccgagagcgcctggcagggttcggcgttcgcacgcggtgatgccgacgatcct
tacacgcggctactttggcgcggcgtggagaatcccttggcgccgcccttcgatctgctt
gcgaataccgtgttcgggccggtggttcaacatctcgaagtcgtggagggcgcatga
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