Pandoraea pnomenusa RB38: DA70_21710
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Entry
DA70_21710 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DA70_21710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_21710
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DA70_21710
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DA70_21710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
UvrD-helicase
SH3_13
SLFN-g3_helicase
AAA_22
RecD_N
Herpes_Helicase
DEAD
nSTAND3
PhoH
CbiA
AAA_25
DUF4350
UvrD_C
T2SSE
AAA_16
TraI_hel_assoc_N
MukB
Flavi_DEAD
AAA_28
KTI12
Motif
Other DBs
NCBI-ProteinID:
AHN76802
LinkDB
All DBs
Position
complement(4189762..4191960)
Genome browser
AA seq
732 aa
AA seq
DB search
MNELRRTADTPSGAQADSGVVRLAQGFARRMALLAKGNGADEVTCRYVWRASLAVSLATA
EGHVCVPLGDLLDTQASGELFPGDAPSLAVWREALFASGLCARASLAHALTNHAPTGAST
GASTIDAPAEAFPLLLDERDRLYLARYYGYEARLATALGRKLSTGQRMAVTSEDRARLRR
YFGEGVLTGADGQPEPNWQMAAAALALQRSLVVLSGGPGTGKTTTVVGLLACLLERDADL
RVALAAPTGKAAQRMQEALTARQDLPETVRQALPEAALTLHRLLGVLPESADQVGRRFRH
HAGNPLPYDLIVVDEASMIDLSMATQLLEAVPEGARLILLGDKDQLAAVEAGAVFGELSA
QRAFSPQMRSRLLDALGWPRDRPPLTGPLARPGAHGQGGVDATADDAEAANTQHTQRARG
LEDAVVWLERTYRFGAHSAIGRLATAIKAGKVIEARKECVAPDTVQMAEVVDMTEMAGAD
RVTLTEDGGIQLSPTNLNALADGYSAYLDALTQAFETIDRLGDPAAASVADVAMVAQPVF
AAFGQFRVLCATRGARRGVEFLGAQLTAVLARRAGVALGAGGGAWFAGRPVLVTQNEYAL
NLFNGDIGIALPLGPSGTLRVAFATPDGGYRLYSPASLPAHETAFAMTIHKSQGSEFDRV
AIVLPEQASRVLSRELIYTGVTRARRQAALYAPWPVIASAIARPTQRDGGLTDRLREVLA
TMPASPPQSRLP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagctgcgtcgcaccgccgacacgccgtcgggggcgcaagccgacagcggtgtc
gtgcgtctcgcgcaaggtttcgcacgccgcatggccctgctcgccaagggcaacggcgcc
gacgaggtgacgtgccgctatgtctggcgtgcctcgcttgccgtaagcctcgcgactgcg
gaaggtcatgtgtgcgtgcccctcggcgacctgctcgacacccaggccagcggcgagttg
tttcctggcgacgccccttcgctggccgtctggcgagaggcccttttcgccagtggtctg
tgcgcgcgggcaagcctcgcgcatgcattgacgaaccatgcgcccacaggcgcgtcgact
ggcgcgtcgacgatcgatgcgccggccgaggcgtttccgctgttgctcgacgagcgcgat
cgtctctatctggcgcgctattacggctacgaggcgcgtctggcgacggcgctcgggcgc
aagctctcgactgggcagcgcatggccgtcacctccgaggaccgcgctcgcttgcgacga
tacttcggcgagggggtgctgacgggggcggacggacaaccggaaccgaactggcagatg
gcggctgccgcgctggcgctccaacgctcgttggtggtgctcagcggcggccccggcacc
ggcaagaccacgacagtggtcggtttgctagcctgcctgctggagcgcgacgccgatctg
cgcgtcgcgctggcggcgcccacgggcaaggccgcgcaacgcatgcaggaggcgctcacc
gcgcgccaggatctgcccgagaccgtgcggcaggcgctgcccgaggcggcactcaccctg
caccgtctgctcggcgtgcttcccgagtccgcggatcaggtcggacgtcgcttccggcat
catgcgggcaatccgctgccctacgatctgatcgtggtggacgaggcatcgatgatcgac
ttgtcgatggcgacgcaactgctggaagccgtgccggagggcgcccgtctgattctcctg
ggtgacaaggaccaattggcggccgtggaggccggggcggtcttcggcgaactgagcgcg
cagcgtgcgttttcgccgcagatgcgttcgcgtctgctcgacgcgctggggtggccgcgg
gatcgtccaccgctcacggggccgttggccaggcctggtgcgcacggtcaaggcggtgtc
gacgcaactgccgatgatgccgaagcggcgaacacgcagcacacgcagcgcgcccgcggg
cttgaagatgcggtggtctggctcgaacgcacctatcggttcggtgcccactcggccatt
ggccgactggctaccgccatcaaggcgggcaaggtcatcgaggcgcgcaaggagtgtgtc
gcgccggacaccgtccagatggcggaagtggtggatatgacggaaatggcgggggcggac
agggtgacgctgaccgaggacggcggcatccagttgtcgccgacgaatctcaatgcgctc
gccgacgggtattcggcttacctcgacgcgctgacgcaggccttcgagacgatcgatcgg
ctcggcgaccctgcggcggcgagtgtcgctgacgtcgccatggtcgcgcagccggttttc
gccgccttcggacaattccgcgtgctgtgcgccacgcgcggcgctcgccgcggcgtcgag
ttcctcggcgcacaactgacggccgtgctggcgcgacgcgcgggcgtcgccctcggcgct
ggcggcggggcatggtttgcggggcgtccggtactggtcacgcagaacgagtacgcgttg
aacttgttcaacggcgacatcggcatagccctgccgctcggtccgtccggtacgctgcgt
gtggcgttcgccacgccggacggcggctaccgactgtactcgccggcaagcctgcccgca
cacgagaccgcgttcgcgatgacgattcacaagtcgcaaggctcggagttcgatcgcgtc
gcgatcgtcctgcccgagcaggcgagccgtgtgctctcgcgggaattgatctacacgggc
gtgacgcgtgcccgccggcaagccgcgctttatgcgccgtggccggtcatcgcatctgcc
atcgcgcggccgacgcagcgcgacggcggcttgaccgaccgcttgcgcgaggtgttggct
acgatgccggcttcgccgccgcaatcgcggcttccgtga
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