Pandoraea pnomenusa RB38: DA70_21725
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Entry
DA70_21725 CDS
T03067
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00730
Thiamine metabolism
ppno01100
Metabolic pathways
ppno01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DA70_21725
Enzymes [BR:
ppno01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DA70_21725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AHN76804
UniProt:
A0A378YIK5
LinkDB
All DBs
Position
4184819..4186735
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AA seq
638 aa
AA seq
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MNANPKFLSANARVDEAAIAPLPNSRKIYVQGSRPDIQVPMREISQADTPTSFGGEKNPP
IYVYDTSGPYTDPNAKIDIRSGLPALRAAWIEARGDTEALPGLTSAYGRERAADAATAEL
RFPGLHRTPRRAKAGKNVTQMHYARQGIITPEMEYIAIRENLRRQEYIESVRQTGPQGER
LAKLLSRQHPGQHFGASIPAEITPEFVRSEIARGRAIIPNNINHPESEPMIIGRNFLVKI
NANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPI
YQALEKVNGKAEELTWEMFRDTLIEQAEQGVDYFTIHAGVRLAYVPMTANRMTGIVSRGG
SIMAKWCLAHHKESFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIYDANDEAQLSELKTL
GELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLEYCDEAPFYTLGPLTTDIAPGYDHI
TSGIGAATIGWYGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGSQIR
DNALSKARFEFRWEDQFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQD
VRDYAAKQGITDEAALKQGMEVKAVEFVKSGAEIYRRT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaacccgaagttcctctcagccaacgcgcgcgtggacgaagccgcgatcgca
ccgctgccgaattcccgcaagatctacgtgcaaggctcgcgcccggacatccaggtgccg
atgcgtgaaatctcgcaagccgacaccccgacgagcttcggcggcgaaaagaacccgccg
atctacgtgtacgacacctcgggcccgtacaccgatccaaacgccaagatcgacatccgc
tccggcctgccggccctgcgtgccgcatggatcgaagcgcgcggcgacaccgaagcgcta
ccgggcctgacctcggcctacggccgcgagcgcgccgccgacgccgcgaccgcggagctg
cgcttcccgggcctgcatcgcacgccgcgtcgcgccaaggccggcaagaacgtgacgcag
atgcactacgcgcgtcagggcatcatcacgcccgaaatggaatacatcgcgatccgcgaa
aacctccgccgtcaggaatatatcgaaagcgtgcgccagacgggcccgcaaggcgagcgt
ctggccaagctgctctcgcggcagcatcccggccagcatttcggcgccagcatcccggcg
gagatcacgccggagttcgtgcgcagcgaaatcgcacgcgggcgcgccatcatcccgaac
aacatcaaccacccggaatcggagccgatgatcatcggccgcaacttcctcgtgaaaatc
aacgcgaacatcggcaactcggccgtgacgtcgtcgatcggcgaggaagttgacaagatg
acgtgggcgatccgctggggcggcgacacggtgatggatctgtcgaccggcaagcacatc
cacgaaacgcgcgagtggattctgcgtaacagcccggtgcccatcggcaccgtgccgatc
tatcaggcgctcgaaaaggtcaacggcaaggccgaggaactgacgtgggaaatgttccgc
gacacgctcatcgagcaggccgagcaaggcgtcgactacttcacgatccacgccggcgtg
cgtctcgcctacgtgccgatgacggccaaccgcatgaccggcatcgtcagccgcggcggc
tcgatcatggccaagtggtgtctcgcgcatcacaaggaaagcttcctgtacacgcacttc
gaagaaatctgcgaaattatgaaggcgtacgacgtcgccttctcgctgggtgacggcctg
cgccccggctcgatctacgacgccaacgacgaagcgcagctctccgaactcaagacgctg
ggcgaactcacccagatcgcgtggaagcacgacgtccaggtgatgatcgaaggcccgggc
cacgtgccgatgcaactcatcaaggagaacatggatctccagctcgagtactgcgacgaa
gcgccgttctatacgctcggaccgctcacgacggacatcgcgccgggctacgaccacatc
acgtcgggcatcggtgcagcgaccatcggctggtacggcacggccatgctgtgctacgtc
acgccgaaggaacacctgggtctgccgaacaaggacgacgtcaaggaaggcatcatcacg
tacaagctcgccgcacacgccgccgatctcgccaagggccaccccggttcgcagattcgc
gacaacgcgctgtcgaaggcgcgtttcgaattccgttgggaagaccagttcaacctgggt
ctcgatccggacaaggcgcgcgaattccacgacgaaacgctgccgaaggattcggccaag
gtcgcgcacttctgctcgatgtgcggtccgcacttctgctcgatgaagatcacgcaggac
gtgcgcgattacgcggccaagcaaggcattacggacgaagccgccctcaagcagggcatg
gaagtcaaggccgtcgagttcgtcaagagcggcgccgagatctatcgccgcacctga
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