Pandoraea pnomenusa RB38: DA70_21800
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Entry
DA70_21800 CDS
T03067
Name
(GenBank) lipid ABC transporter permease/ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DA70_21800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_21800
Enzymes [BR:
ppno01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DA70_21800
Transporters [BR:
ppno02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DA70_21800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_25
AAA
AAA_22
AAA_29
DEAD
RsgA_GTPase
AAA_30
AAA_33
AAA_21
NB-ARC
AAA_24
AAA_5
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHN76818
UniProt:
A0ABY6WN39
LinkDB
All DBs
Position
complement(4163778..4165529)
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AA seq
583 aa
AA seq
DB search
MSATHKPTGPILRRLLGYLQPYWHMGLLAVLAMALVAGTEAAIPAVLKPVLDKGFSGGDP
WKLWYVPAAVIGLAVIRGLAQYSANYMLSWVSNRVLLDLRVRMFERLLHAPAAYFQRETT
STLINAIVYEVNQVLGVLTTVLITLVRDSLTVVGLLGYLFYLNWRLTLVVAVILPLIGWL
VGKINRRLRRLNREQQTLTNALSYVVEEAVGGYKVVKIHNGEAYEKSRFDKMTGTLRGYA
MRVTVSGGLAQPVTQALASLALAIVITVAMIESSSGEMTVGGFTAFVTALLLVVSPLKHL
MDVNQPLQRGVTAAELIFDVMDVEVEPTGGDRRLERAKGRVTFDQVSFNYGAAERPTLDR
ISLDVAPGEMVALVGPSGSGKTTLVNLVPRFFDPTGGRILLDDIPLDELRLADLRSQIAF
VSQDVVLFNDTIAANVAYGQEIDPERVQAALRAANLADAVAAMPDGVQTMVGDNGMRLSG
GQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALEVLMEGRTTLVIAHRLSTIE
RADRIVVLEHGRIVEQGSHNELVAHNGLYAHLHRIQYAQQQEA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacgcacaagcccaccggcccgattcttcgccgtctgctgggctatctccag
ccctattggcatatgggcctgctggccgttcttgccatggcgctcgtggcgggaaccgaa
gccgccatcccggccgttctcaagccggtgctcgacaagggcttttcgggcggcgacccg
tggaagctgtggtacgtgccggccgcggtcatcggcctggcggtcatccgggggctggcg
cagtattcggccaactacatgctctcctgggtgtcgaaccgcgtgctgctcgacctgcgc
gtgcggatgttcgagcgtctgctgcacgccccggcggcgtatttccagcgcgagacgacc
agcacgctcatcaacgccatcgtctacgaagtcaaccaggtgctcggcgtgctgaccacg
gtgctcatcacgctggtgcgcgactcgctcaccgtcgtcggtctgctgggctatctgttc
tatctgaactggcggctcacgctcgtggtggccgtcattctgccactcatcggctggctg
gtcggcaagatcaaccgtcgtctgcgccgcctgaaccgcgagcagcagacgctgaccaat
gcgctgtcgtacgtggtcgaagaggcggtgggcggctacaaggtcgtgaagatccacaac
ggcgaagcctacgaaaagtcgcgtttcgacaagatgaccggcacgctgcgcgggtacgcc
atgcgcgtgactgtgtcgggcgggcttgcccaacccgtcacgcaggcgctcgcgtcgctc
gcgctggccatcgtcatcacggtggcgatgatcgaatcgtcatcgggcgagatgaccgtg
ggtggcttcaccgccttcgtgacagcgttgctgctggtggtctcgccgctcaagcatctg
atggacgtcaaccagccgctgcaacgcggtgtgacggccgccgagctgattttcgacgtg
atggacgtggaagtcgagcccacgggcggtgatcgccggctcgagcgcgccaaggggcgc
gtgacgttcgatcaggtgagcttcaattacggtgcggccgagcgtccgacgctcgacagg
atttcgctcgatgtcgcgcccggcgagatggtggcgctggtggggccgtccggcagcggc
aagacgacactggtcaatctggtgccgcgcttcttcgatcctaccggcgggcgcattctg
ctcgacgatattccgctcgacgaactacgtctggccgacctgcgcagccagatcgcgttc
gtgagccaggacgtggtgctgttcaacgacaccatcgccgcgaacgtggcctacggtcag
gaaatcgatccggagcgcgtgcaggcggcgctgcgggcggccaatctcgccgatgcggtc
gcggccatgcccgacggcgtgcagacgatggtgggcgacaatggcatgcgcctatcgggt
ggccagcgtcagcgcctggcgattgcccgcgcgatctacaaggacgcaccgattctgatc
ctcgacgaagcgacctccgccctcgactcggagtccgagcgtcacgtgcaggcggcgctc
gaggtactgatggaagggcgcaccacgctggtgatcgcgcaccgtctgtcgaccatcgag
cgcgccgatcgcatcgtggtgctggaacatggccgcatcgtggagcagggctcgcacaac
gaactggtggcgcataatggcctttacgcccatttgcaccgtatccagtacgcccagcaa
caggaagcctga
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