Pandoraea pnomenusa RB38: DA70_23075
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Entry
DA70_23075 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00550
Peptidoglycan biosynthesis
ppno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DA70_23075
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppno01002
]
DA70_23075
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppno01011
]
DA70_23075
Enzymes [BR:
ppno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DA70_23075
Peptidases and inhibitors [BR:
ppno01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DA70_23075
Peptidoglycan biosynthesis and degradation proteins [BR:
ppno01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DA70_23075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AHN77031
LinkDB
All DBs
Position
3894410..3895939
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AA seq
509 aa
AA seq
DB search
MSGTGRTALALALLLATSAVMTSAPVYAKPLKHAKMPKVPATAAHATPLPPELARALAAS
KVPAANVSVIVAKVDNPLQTRGRIAAPLLAMNPGVPRNPASTMKLVTTIAALDTLGPDYR
WRTQAFTDGTSDGRTLDGNLYFKGTGDPKLVPEEMEKFVAELRNAGVTNINGDIVLDRSA
YSSDIGATGAIDGEDDRPYNVAPDPLLYSFKAMSFSFAGNANGTVDVNVLPPLANLQVAN
DMASSPAGNCGDWLTRIHPTLSTTADGAYVARFSGNYPASCEDKGWNVAAPDRDRFFLGG
FRALWQASGGQFNGNVRTGTVPPGARLLVTHRGQTLADVVHDMNKFSNNVMARQLFLTLG
LAADNYKHPASIARSRDVLDRWLDRNDFAMPGLVIENGSGLSRIERISASELATLLQHGI
NSPTGQVLVESMPTVGVDGTMRNRLTNRDVAGNAHIKTGTLDDVTAVAGYVGTRTGNTYV
VVSLVNDPRASNARGFNDALISWVYEHAP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaccggtcgcaccgccctggcgctcgcgctgctgctcgcgacgagtgcggtc
atgacgagcgcgcccgtatatgcaaagccgctcaagcacgcgaagatgcccaaggtgcct
gccaccgccgcgcacgcaacgccgctgccgcccgaactggcacgcgcgcttgcagcgagc
aaggtgcccgccgcaaacgtgagcgttatcgtcgcgaaggtcgacaatccgctgcaaacg
cgaggccgcattgcggcgcccctgctcgccatgaaccccggcgtgccgcgcaacccggcc
tcgacgatgaaacttgtcaccaccattgccgcgctcgatacgctgggcccggactatcgc
tggcgcacgcaggccttcaccgacggtacgtcggacggacgcacgctcgacggcaacctg
tatttcaagggcacgggcgatccgaagctcgtgcccgaagagatggagaagttcgtggcc
gagctgcgcaacgccggcgtgaccaacatcaatggcgacatcgtgctcgaccgctcggcc
tacagttcggacatcggcgcgacgggtgcgatcgatggcgaggacgaccgcccctacaac
gtcgcgcccgatccgctcctgtattccttcaaggcgatgtcgttcagcttcgcgggcaac
gcgaacggtacggtcgacgtgaacgtgctgccgccgctggcgaatctgcaagtggcgaac
gacatggcgtcgtcgcccgcgggcaattgcggcgactggctcacgcgcatccacccgacg
ctcagcacaaccgcggacggtgcctacgtggcgcgcttctccggcaattacccggcgtct
tgcgaggacaagggctggaacgtggcggcgcccgatcgcgaccgcttcttccttggcggc
tttcgcgcgctatggcaggcgtcgggcggacagttcaacggcaatgtgcgcaccggcacc
gtgcccccgggcgcccgtttgctcgtcacccaccgaggtcagacgctggccgacgtcgtt
cacgacatgaacaagttcagcaataacgtgatggcgcgccaactgttcctcacgctcggg
ctcgccgccgataactacaaacaccccgcgagcatcgcccgctcgcgcgacgtcctcgat
cgctggctcgacaggaacgatttcgccatgcccggactcgtcatcgagaacggctcgggc
ctgtcgcgcatcgagcgcatcagcgcgtccgaactcgcgaccctgctgcaacacggcatc
aacagcccgaccgggcaagtgcttgtcgagtcgatgccgaccgtgggggtggacggcacc
atgcgcaaccgtcttacgaatcgcgacgtggccggcaacgcccacatcaagaccggcacg
ctggacgacgtgaccgccgtggccggctacgtcggcacgcgcacgggcaacacctacgtc
gttgtctcgctggtcaacgacccgcgcgcgagcaacgcacgcggcttcaacgacgccctc
atctcctgggtgtacgagcacgcgccctga
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