Pandoraea pnomenusa RB38: DA70_23535
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Entry
DA70_23535 CDS
T03067
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA70_23535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppno03000
]
DA70_23535
Transcription factors [BR:
ppno03000
]
Prokaryotic type
Helix-turn-helix
IclR family
DA70_23535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
Rrf2
HTH_20
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AHN77111
LinkDB
All DBs
Position
complement(3796185..3796931)
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AA seq
248 aa
AA seq
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MVRAVHILDVIAASSEPVALADLARETGVPKSTLHGLCDTLVKLRLVKRHANGGMTMGSY
VMGWANAFLSQTNITEEFRAVWEASRAFAQETVTLSVLDGAEVIYLACHNGNRPLGVTFR
IGMRLPAPYTATGKAMLSTLPPGEAADLLAGAWPAPLTRASVATYPALAEEMAQVRRDGY
SIDNGQMREGMICFGAPVFDASGERAVAGLAVSFLTNEIDAETGRRIGRQMRELADQLSV
RLGAPARR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcgcgccgtgcacatcctcgatgtgattgccgcgtcgtccgagccggtggcgctg
gccgacctggcgcgcgagacgggcgtgcccaagagcacgctgcacgggttgtgcgacacc
ctggtcaagctgcggctggtcaagcgccatgccaacgggggcatgacgatggggtcgtat
gtgatggggtgggcgaacgcctttctctcgcagaccaatatcaccgaggagttccgcgct
gtctgggaagcgtcgcgggcgttcgcgcaggaaaccgtgacgctgtccgtgctcgacggc
gccgaggtgatctacctggcctgtcacaacggcaatcgcccgctgggtgtgacgtttcgc
atcggcatgcgattgccggcgccgtacacggccaccggaaaggccatgctctcgacgttg
ccgcccggcgaggcggccgatctgctcgccggcgcctggcccgcaccgctcacgcgtgcg
agcgtggcgacatatccggcgttggccgaagagatggcgcaggtgcgccgcgacgggtac
tcgatcgacaacggccagatgcgtgaaggcatgatctgcttcggcgccccggtgttcgac
gccagcggcgagcgtgccgtggcgggcctcgccgtgagtttcctgaccaacgagatcgac
gccgagaccgggcgccgcatcgggcgccagatgcgcgaacttgccgatcagctttcggtc
cggctgggcgctccagcccgccgataa
DBGET
integrated database retrieval system
