Pandoraea pnomenusa RB38: DA70_23890
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Entry
DA70_23890 CDS
T03067
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00260
Glycine, serine and threonine metabolism
ppno00460
Cyanoamino acid metabolism
ppno00630
Glyoxylate and dicarboxylate metabolism
ppno00670
One carbon pool by folate
ppno00680
Methane metabolism
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01120
Microbial metabolism in diverse environments
ppno01200
Carbon metabolism
ppno01230
Biosynthesis of amino acids
ppno01240
Biosynthesis of cofactors
ppno04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DA70_23890 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DA70_23890 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DA70_23890 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DA70_23890 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DA70_23890 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DA70_23890 (glyA)
Enzymes [BR:
ppno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DA70_23890 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AHN77171
UniProt:
A0A378YHN3
LinkDB
All DBs
Position
complement(3727292..3728539)
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AA seq
415 aa
AA seq
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MFDKSKSTVAAVDPDVWAAIQKENQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKALFGAEAANVQPNSGSQANQGVYFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLAQQHKPKMIVAGASAFAL
KIDFERMARIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKAINSAIFPGIQGGPLMHVIAGKAVAFKEAATPEFKAYQEQVVKNARVLAETL
VKRGLRIVSGKTESHVMLVDLRAKNITGKAAEAALGEAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFKEAEAELVGNLIADVLDNPENAETLATVRAKVAELTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaatcgaaatccaccgttgccgccgtcgatcccgacgtgtgggccgcgatt
cagaaggaaaaccagcgtcaggaagaccacatcgagctgatcgcgtcggaaaactacacc
agcccggccgtgatggaagcgcagggctcgcaactgaccaacaagtatgcggaaggttat
ccgggcaagcgctattacggtggttgcgagtatgtcgacgtggtcgaacaactggcgatc
gatcgggtgaaggcgctgttcggtgccgaggccgcgaacgtgcagccgaactccggctcg
caggccaaccagggcgtgtacttcgccatgctcaagccgggcgacacgatcatgggcatg
agcctcgcccacggcggtcacctcacgcacggctcgccggtcaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagaacgaagacatcgattacgacgctgccgag
aaactcgcgcagcaacacaagccgaagatgatcgtggcgggcgcatcggccttcgccctg
aagatcgacttcgagcgcatggcgcgcatcgccaagtcggtcggcgcctatttcatggtc
gacatggcgcactatgccggcctgatcgccgcgggcgtgtacccgaaccccgtgccgcac
gccgatttcgtgacgaccaccacgcacaagagcctgcgcggcccacgcggcggtgtgatc
ctgatgaaggccgagttcgagaaggccatcaattcggcgatcttcccgggaatccagggt
ggcccgctcatgcacgtgatcgccggcaaggccgtcgcgttcaaggaagccgccacgccg
gaattcaaggcgtatcaggaacaagtcgtgaagaacgcacgcgtgctggccgagacgctg
gtcaagcgtggcctgcgcatcgtgtcgggcaagaccgaatcgcacgtgatgctggtcgac
ctgcgcgccaagaacatcaccggcaaggctgccgaagccgcgctgggtgaagcgcacatc
accgtcaacaagaacgccattccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgtctgggctcgccggccatgaccacgcgtggcttcaaggaagctgaagccgagctggtc
ggcaacctgatcgccgacgtgctggacaacccggaaaacgccgaaacgctggccacggtc
cgcgccaaggtcgccgagttgaccaagcgcttcccggtctacggctaa
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