Pandoraea pnomenusa RB38: DA70_24330
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Entry
DA70_24330 CDS
T03067
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppno03000
]
DA70_24330
Transcription factors [BR:
ppno03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DA70_24330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AHN77247
LinkDB
All DBs
Position
3618795..3620348
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AA seq
517 aa
AA seq
DB search
MNPKAAAPLHEPVPENVAALFDSPLSVGAGRGTSLQKQLLSRLKHAILEGRLPAGARLPA
SRTLAEDLSVSRNTVSIVYDQLAAEGFIVPHRLGTRVAHLSIDPQIAAEAAEAARQRTVA
PLPPSDSEAPPLASRRLQRLPATRHAARAGESPLPFTPGVPALTRFPASTWRRTLERVMR
EAPPRLYHYGDPLGEPALREAIAGHLRISRGVRCDASQVVITEGAHEALILCVRLLTDPG
DAVWMEDPGYRGAKAAFHSSDVRLHALRVDDEGIVIPDGWWKRMPPRLVYVTPSHQYPLG
SVLSAARRLDLIAQARRHGAWILEDDYDSEFRHQGEPIAAMQGMVPDAPVVYVGTFSKTM
FPALRLGFLILPPSLLAQARDALDELLRGGHRFEQLALADFIRSGQFARHLGRMRRLYRE
RQSALRDALSAHFGPSYAVIGERCGLHLTVRLDPAFPDKAIVATAQREGIGPRALSSFAL
DPQPADNGLVIGYGDTDAARIPGLIKRLAAIVASQAA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaaagcggctgcgcccttgcacgaacccgttcccgaaaacgtcgccgcgctc
tttgacagtccgttgagcgtcggtgccgggcgcggcacctcgctgcaaaagcaactgctc
tcacggctcaaacacgccattctcgaggggcgcctgccggccggtgcgcggctgcctgcc
tcgcgcacgctcgctgaagatttgtccgtttcccgaaatacggtgtcgatcgtctacgac
cagctcgctgcggaaggtttcatcgtgccgcaccggctcggtacgcgtgtggcgcacctg
tccatcgatccgcaaatcgcggcagaagccgccgaggcggccaggcagaggaccgtcgca
ccgttgccgccgtccgattcggaagcaccgccactggcctcgcgccgcctgcaacgcctg
ccggccacacgtcatgccgcgcgcgccggcgagtcaccgctccctttcaccccgggcgtg
ccggcgctgacgcgttttccggccagtacgtggcggcgcacgctcgagcgagtcatgcgc
gaggcgccgccgcgcctctatcactacggcgaccctctgggcgagcccgccctgcgcgag
gccatcgcgggccacctgcgcatctcgcgcggcgtgcgctgcgacgcctcgcaggtcgtc
atcaccgaaggcgcccacgaggcgctgatcctttgtgtacgcctgctcaccgatccgggc
gacgccgtctggatggaagatcccggctatcgcggcgccaaggccgcctttcattcgagc
gacgtgcgcctgcacgcgctgcgggtggatgacgaaggcatcgtgattcccgatggatgg
tggaaacgcatgccgccgcggctcgtgtacgtcacgccgtcgcaccaatacccgctcggc
agcgtgctctcggccgcgcgacggctcgacctgatcgcgcaggcgcgccgccatggcgcc
tggattctcgaagacgactacgacagcgaattccgtcaccagggcgaaccgatcgcggcc
atgcaggggatggtgcccgacgctcccgtggtgtacgtgggcacattcagcaagacgatg
ttcccggcgctgcgcctgggcttcctgatcctcccgccgtccttgctcgcgcaagcccgc
gatgccctcgacgaattgctgcgcggcggccatcgcttcgaacagctcgcgctcgcggac
ttcattcgcagcggccagttcgcgcgtcacctgggccgcatgcgacgactgtaccgggag
cgtcagagcgcattgcgcgacgcgctctcggcacacttcggaccgagctatgcggtgatc
ggcgagcgctgcgggctgcacctcacggtgcgtctggacccggcgttccccgacaaggcc
atcgtggcgacggcgcagcgcgaagggatcggcccgcgggcgctgtcgagctttgcgctc
gatccgcaaccggcggacaacgggctggtgatcggctacggagacacggacgccgcccgc
atccccggcctcatcaaacgacttgcggcgatcgtggcgtcgcaagccgcttag
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