Pandoraea pnomenusa RB38: DA70_24505
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Entry
DA70_24505 CDS
T03067
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ppno
Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppno01011
]
DA70_24505
Enzymes [BR:
ppno01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DA70_24505
Peptidoglycan biosynthesis and degradation proteins [BR:
ppno01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DA70_24505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
DUF6491
Motif
Other DBs
NCBI-ProteinID:
ALU64293
UniProt:
A0A378YG61
LinkDB
All DBs
Position
complement(3597807..3599480)
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AA seq
557 aa
AA seq
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MRLIVSLLLTLLLAACASTAPTTGASNTTPDAQSKSPLASTAKGKQRVSSDQTIDLDNDS
INDLAYGSDDADLWSRIRHGFAIPDLDTDLAQDRTQWYAQRPEYVERMIDRSSKYLFHIV
EELERRHMPTELALLPFVESAYNPQALSTAKAAGMWQFIPSTGKTYNLKQNMWQDQRRDV
LASTTAALDYLSKLYAMFGDWHLALAAYNWGEGNVQRAIDRNQAQGLPTDYLSLRMPTET
RYYVPKLQAIKNIIAHPDVYSVKLPDIPNHPYFVSVTTKRDIDVALAAKLADLPLDEFRA
LNPSFRKPVILGAGQPQILLPFDSAEVFQRRLKSYDKPLSSWTTYTSSSRERPEDVARKL
GVDAAVIRSVNNIAPRMRLKAGSTLLVPRSDDIDQDISPSVASNAVLALEPDLPDTRKIM
VRARKRDTLAAVASRSGVSVAQIKSWNRLRSDRLTSGQLLVLHVPVKDASRVAAASAPAA
KDDEEAPRTRMVRGKNGKMIRVVDHRPAAKPAKVAASSKAAPARTTGKTAKASAKAVTRT
AKAPAKASTKVTKTAQR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatcgttagcttgttactgacgctgcttctggcggcttgcgccagcacagcg
ccgaccacaggtgcgtcgaatacgactcccgatgcgcagagcaagtcgcctctcgcctcg
accgcaaaaggcaaacaacgcgtttcgagcgatcagaccatcgacctcgacaacgactcg
atcaacgatctggcctacggcagcgacgacgccgatctctggtcacgtatccgccacggc
tttgccatccccgatctcgacaccgacctcgcgcaggaccgcacgcagtggtacgcgcag
cgccccgagtatgtcgagcgcatgatcgaccggtcgagcaagtacctgttccatatcgtc
gaagaactcgagcgccgtcatatgccgacggaactcgcgctgctgccgttcgtggaaagc
gcttacaacccgcaggcgctctccacggcgaaggcggccggtatgtggcagttcattccc
agcaccggcaagacgtacaacctcaagcagaacatgtggcaggatcagcgccgcgatgtg
ctcgcatcgacgaccgccgcgctcgactatctgtcgaagctctacgcgatgttcggcgac
tggcacttggcgcttgccgcgtacaactggggcgaaggcaacgtgcagcgcgccatcgac
cgcaatcaggcgcaggggctgccgaccgactacctgagcctgcgcatgccgaccgaaacg
cgctactacgtgccgaagctgcaggcgatcaagaacatcatcgcgcaccccgacgtctac
agcgtcaagctgccggacattccgaatcacccgtatttcgtgagcgtgacgaccaagcgc
gacatcgacgtggcgctcgccgccaagctcgccgacctgccgctcgacgaattccgcgcg
ctcaacccgtcgttccgcaagcccgtgatcctgggcgcggggcagccgcagatcctgctg
ccgttcgacagtgcggaagtgtttcagcgtcgcctgaagagttacgacaagccgctctcg
agctggacgacctacacctcgtcttcgcgcgagcgtccggaagacgttgcccgcaagctc
ggtgtcgacgccgcggtgatccgctccgtcaacaacatcgcgccgcgcatgcgcctgaag
gcgggctcgacgctgctggtgccgcgctcagacgacatcgaccaggacatcagcccgtcg
gtggcgagcaatgccgtgctggcgctggagccggacctgccggatacgcgcaagatcatg
gtgcgtgcgcgcaagcgcgacacgctcgctgccgtcgcgtcgcgcagtggcgtgagcgtc
gcgcagatcaagagctggaatcgtctgcgcagtgacaggctcacgtcgggccaactgctg
gtgcttcacgtgccggtcaaggacgcttcgcgtgttgccgctgcatcggcgcctgccgcc
aaggatgacgaggaagcgccgcgcacgcgcatggtgcgtggcaagaacggcaagatgatt
cgcgtggtcgaccatcgacccgccgccaagccggcgaaggtggccgccagcagcaaggcc
gctccggccaggacgactggcaagaccgccaaggcgtcggcaaaggcggtgaccaggacc
gcgaaggcgccggcgaaggcctcgacgaaggtcaccaaaacggcgcagcgctga
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