Paenibacillus polymyxa M1: PPM_0082
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Entry
PPM_0082 CDS
T01968
Symbol
yaaD
Name
(GenBank) pyridoxal biosynthesis lyase pdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00750
Vitamin B6 metabolism
ppo01100
Metabolic pathways
ppo01240
Biosynthesis of cofactors
Module
ppo_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
PPM_0082 (yaaD)
Enzymes [BR:
ppo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
PPM_0082 (yaaD)
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Motif
Pfam:
SOR_SNZ
ThiG
NMO
IGPS
His_biosynth
TetR_C_27
NanE
Motif
Other DBs
NCBI-ProteinID:
CCC83019
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Position
121659..122540
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AA seq
293 aa
AA seq
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METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGATAVMALERVPSDIRAAGGVARM
ADPTIVEEVMKVVSIPVMAKARIGHFVEAKVLESLGVDYLDESEVLTPADEVFHIDKREF
TVPFVCGAKDLGEALRRIGEGASMIRTKGEPGTGNIVEAVRHMRFINGQIRKVQNLSKDE
LYAEAKNLGVAYELLLEVHELGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
DSPEKFARAIVEATTHYTDYKLIAEVSKNLGTPMKGIEISKLASHERMQDRGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggaacttcgcgtgtaaaaagaggtatggcagagatgcaaaaaggtggcgta
atcatggatgtcatgaacgctgaacaggctaaaattgcagaggcagcaggcgctacagcc
gtaatggctcttgaacgagtgccttcggatatccgtgcagctggtggggttgctcgtatg
gctgaccctacgattgtggaagaggttatgaaggttgtttctattcctgttatggctaag
gctcgtattggtcactttgttgaggcaaaggtactcgaatctctcggtgttgactatctc
gatgagagtgaagtattgacacctgcagatgaggtgttccatatcgataagcgggagttc
actgttccatttgtttgtggagccaaggatctaggggaagcattgcgtcgtatcggtgaa
ggcgcatctatgatccgtacaaagggtgagccgggaactggaaatattgttgaggctgtt
cgtcacatgcggtttattaatggtcaaattcgcaaggtgcaaaacctgtcgaaggacgag
ctgtatgcagaagcgaaaaacctcggagttgcttatgaactgctgttggaagtgcatgag
cttggtaagctaccagtggtcaactttgcagcaggcggtgtagcaacacctgcggatgct
gcgttgatgatgcatttaggcgctgatggtgtctttgtaggctctggtatcttcaagtcg
gacagccctgagaaatttgcacgggcaattgtggaagcgaccactcattacacagattac
aagctgattgcagaagtgtccaagaatttgggaacacctatgaaaggcattgaaatttcc
aaactggcatcgcatgagcgcatgcaggatcgtggttggtaa
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